| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1801 |
|---|
| Symbol | |
|---|
| ID | 8425316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1851912 |
|---|
| End bp | 1853630 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645027911 |
|---|
| Product | SNF2-related protein |
|---|
| Protein accession | YP_003185202 |
|---|
| Protein GI | 258511768 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0724538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGAGAAC TCGCAAACGA GTCTTTGAGC GCCAGTGATC GCCCGTGGTC GTTTTCCATC
AGCGGATTGG ATGTGGAAGC GGAACTCGAG GCGCTCCTCC ACGTGGGTCG AGGGACCCGA
GACGCCGATT GGGAGCTTTT CCGCCTCGGC GTGATGGCGC GTCAGGCTTG GATTGCACCG
ACGTTTGACC AACTGCTCGC CCTGGAACAC GTGCAGTTCA CGCCGCTGCC GCATCAGGTA
GAAACTGCTC TCCGGGTCGT GCGCGATCTG CGCGGGAGAG CCATCCTTGC AGATGAGGTG
GGGCTCGGCA AAACAATTGA AGCGGGGCTC GTTCTCAAGG AATATCTCGT GAGAGGGCTC
GTCCGCAGGG CACTCGTCCT TGTGCCAGCG TCCCTCGTGT CGCAGTGGAC CAAGGAGTTG
AACCAGAAAT TTCGCATCGA CGCGATTCCT CAGCGCGACG AATGGACATG GGAGGCGGAG
GGCGTCGTCG TTGCCTCCAT CGACACGGCC AAGCGGCCCC CGCACGCCGA ACGGGTTCAA
GCCCAATGGT GGGACATGAT CATCGTCGAC GAAGCGCACA AGCTGAAAAA CCCGAGTACG
AAGAACTGGC AGTTGCTGAA TCAACTTCAA CACAAATACA TGCTCCTGCT CACGGCGACG
CCCATCCAGA ATCAGCTCAA GGAGTTGCAC ACCCTGGTCA CCCTACTCAA GCCTGGAGAA
CTCGGCAATC CTGCGGAATT TGCCGAACGG TTCGTCGCGA GCCCCCGGAC GCCCAAAGAT
CCCGCGGCCC TGCGTCAGAC CATCAGCCGG GTCATGATCC GAAACCGCCG AGAGGACGGA
TCGCTCGAGC TACCCAAGCG TCACGTGCGC GTGGTGCCTG TCGAATTGAC GCCTGAGGAA
CGCGCGTTTT ACGAAGCCGT TCAGGCGTTT TTAAGGAGCG AGTTTGAGCG TTCGCAAACG
GCCCGCACGT CCATTCTCCC GCTCATCACG CTGCAGCGCG AGATCTGCAG TTCCGCGTAC
GCGGCGCTTC TGTCGCTGGA GAAGATGTTG AAGAAGGCGC GCGATCCCGA TCGCGCCCGA
TGCCTGCAGT CGCTGATTGA ACAGGGAACC TCCATCCCGT CGTACGCCAA GGTGGAGGCC
GTGCTCAAGA TGCTGGAGGA TGCGCCGGAA AAGATCATCA TCTTCACGGA GTACCGAGCG
TCGCAAGATT TCTTGATGTA CACGCTGAAG AAACATGGGA TCAGCGCGGT GCCGTTTCGA
GGTGGCTTCC GCCGGGGCAA GAAAGACTGG ATGCGGGAGC TGTTCTCGAA GAAGATCCGC
GTGCTGGTGG CCACCGAATC CGGCGGAGAA GGCATCAATC TTCAGTTTTG TCACCACATG
ATCAATTACG ACCTCCCCTG GAATCCGATG CGGCTTGAAC AGCGCATCGG GCGCATCCAT
CGTCTCGGCC AAACGCACGC GTGCCACATC GCGCACCTCG TGACGAAGGA CACCATTGAA
GAACACATCA TGGAAATCCT GCAAGAGAAG GTTCGCATGT TTGAGGCCGT GATCGGGCGA
CTCGATGACA TTGTCAGTGA CGTCCGATTG GATCTCTGGG AGAAGCGCAT CTTCGAAGCA
GCCATGACAA GCCGCGACGA CGAGGAGTTC GTGACCCAGC TCAAGTCCAT CCAGGTGGAA
GATCTCATGA TGCAAAAAGG AGGTGCTCGT CGCCGTTGA
|
|---|
| Protein sequence | MRELANESLS ASDRPWSFSI SGLDVEAELE ALLHVGRGTR DADWELFRLG VMARQAWIAP
TFDQLLALEH VQFTPLPHQV ETALRVVRDL RGRAILADEV GLGKTIEAGL VLKEYLVRGL
VRRALVLVPA SLVSQWTKEL NQKFRIDAIP QRDEWTWEAE GVVVASIDTA KRPPHAERVQ
AQWWDMIIVD EAHKLKNPST KNWQLLNQLQ HKYMLLLTAT PIQNQLKELH TLVTLLKPGE
LGNPAEFAER FVASPRTPKD PAALRQTISR VMIRNRREDG SLELPKRHVR VVPVELTPEE
RAFYEAVQAF LRSEFERSQT ARTSILPLIT LQREICSSAY AALLSLEKML KKARDPDRAR
CLQSLIEQGT SIPSYAKVEA VLKMLEDAPE KIIIFTEYRA SQDFLMYTLK KHGISAVPFR
GGFRRGKKDW MRELFSKKIR VLVATESGGE GINLQFCHHM INYDLPWNPM RLEQRIGRIH
RLGQTHACHI AHLVTKDTIE EHIMEILQEK VRMFEAVIGR LDDIVSDVRL DLWEKRIFEA
AMTSRDDEEF VTQLKSIQVE DLMMQKGGAR RR
|
|---|
| |