Gene Aaci_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1750 
Symbol 
ID8425265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1810492 
End bp1811376 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content66% 
IMG OID645027860 
Producttyrosine recombinase XerD 
Protein accessionYP_003185151 
Protein GI258511717 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCCAG ACATTCGCAC CTTTCTCGAT CACCTCCGGC TGGAGCGCGG CCTCTCCGAG 
AATACGGCCA CGAGTTACGC GCGCGATCTC GCTGATTTCT CCCAGTACCT CGCGCGCGAA 
CAGCGGACGA TGCGGGACGC GGACCGGACG GCCGTGCTCC GCTATCTGTC CGACCTGAAG 
CGGCGAGGGA TGAAATCGAC GACCATCGCC CGAAGGATGT CCGCGCTTCG CTCGTTCTTT 
CGCTACCTGC TGCGGGAAGG CGTCCTTCAG GCGGACCCGA CGGCGAATAT CGAGGTCGCG 
GCGCCGGACG AGCACCTGCC TCGGGTCGTC TCTGAAGAGG ACGTCGAACG GCTTATCGGC 
GCGGTGCGCC GACCGGATGC CATGGGACTG CGCGATCGCG CCATGTTGGA GACGCTCTAC 
GCGACGGGTG TGCGCGTGAG CGAGCTTCTG GCGCTGTCGC TCGAAGACGT CGAGCTCGCA 
GCGGGGTTTA TCCGCGTGTT CGGAAAGGGC AAGAAGGAGC GCGTGGTTCC ACTGGGTGAG 
ATCGCCCAGG ACGCCCTTGG GCTGTACCTG CGCTACGGCA GGCCGCTTCT GGTGCGAGAC 
CGGGGAGAAA GCGCTGTGTT CCTCAATCGC CTCGGCCGGC GGATGACCCG GCAAGGGTTC 
TGGAATATCC TGAAGGGCTA CGCGCGGCAG GCGGGCGTGT CCGCCGAGGT GACGCCGCAC 
ACGCTTCGGC ACTCGTTCGC CACGCATTTG CTGGAGGGCG GCGCGGATCT CCGGGTGGTG 
CAGGAGCTCT TGGGACACGC CGATATCTCG ACGACGGAGC GGTACACGCA CGTCACACCG 
CACAGGCTTC GCGAGGTGTA TCGCAATGCG CATCCGCGGG CGTGA
 
Protein sequence
MDPDIRTFLD HLRLERGLSE NTATSYARDL ADFSQYLARE QRTMRDADRT AVLRYLSDLK 
RRGMKSTTIA RRMSALRSFF RYLLREGVLQ ADPTANIEVA APDEHLPRVV SEEDVERLIG 
AVRRPDAMGL RDRAMLETLY ATGVRVSELL ALSLEDVELA AGFIRVFGKG KKERVVPLGE 
IAQDALGLYL RYGRPLLVRD RGESAVFLNR LGRRMTRQGF WNILKGYARQ AGVSAEVTPH 
TLRHSFATHL LEGGADLRVV QELLGHADIS TTERYTHVTP HRLREVYRNA HPRA