Gene Aaci_1727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1727 
Symbol 
ID8425242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1792956 
End bp1794728 
Gene Length1773 bp 
Protein Length590 aa 
Translation table11 
GC content60% 
IMG OID645027837 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003185128 
Protein GI258511694 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATACCCA ACAGCATCGT AGCCAAGATG TGGCTGACGA TTGTCGGCAT GGTGTTCGTC 
ATTCAAGCGC TCCTGTCCGT CTTGCTCCAG CAAGTCTTTA ACAAGTACAT TGTCACTCGC
GAAGAAGCGA GCCTCACCCA GCTCGCTTTG ACCATCGAGT CGGTGCTCGC GACGGCAACC
GACCGATCCA TCAAAGAGCA AGTGGCAAGT GATATCGCCA AGCGCGTTGA GCGTGCAACT
GTGGTGTACG GGATCCCGTA CACCGCCAAT GCGGCATTGA AGGCAGCCTA TGACGCGATG
ACGCCTGCAG AGAGGCAGGC TTTGTCGCGC GGTCAGCCGG TCACGCTGCG CGGGGCTTTG
GGCAAGGTCA ATCGGCTCAC CGTGTACGTG CAGATCCCCT CTGCCAGATC GCCACAGCCC
GGCATGTTGG CGGTGTCACA GGACACGAGC GTGCTGGACG AGCCTTTGCG GGAGATCCGC
AACATGGTGC TCTTTGATAC GGTACTCGGC GTGATTCTGG CGACGGGCTT TGCCTTTGTG
ATCTCGAAAA ACCTGTCTCG TCCGCTGGTC GATATGACGC GAGCCGCTGA GGAGATGGCG
CGCGGCCACT ATCGTCAGCG CGTTCGTGTG GTGACGAAGG ACGAGGTCGG CCGGCTCGGG
CACACCTTCA ACGCGCTCGC GCGTCAGTTG GCAGAGACCA TCGAGCAGCT TTCGATGGAG
CGAGAAGGCC TGCAGCGGAT TCTGTCGTCG CTGCAAGACG GCGTGGTGGC GACTGATCTC
GACGGCCGCG TCGTGTTGGC CAATCCTCCT GCGAAGCGCC ATTTGCGCCA CCTCTCGGTG
GCGGAGCGAG GGATCGTCGA TGAGGAGAGA CTCCCCGATC GTCTCATGAG CCTATGGGTG
CGCGTGCGCG AACAGCAGGA TGCCGTGTAC CGCGAGGACA CCTGGGACGG CCGCACCATC
GGCATTACGA TGCTCCCTCT CTATGAGACG GACGGTACGA CGTTGCGCGG CGCACTCTGT
GTCCTCCGCG ACATCACCGA GGAGAGGCGG CTGGATCGCC TCCGCAAGGA CTTCATCGCG
AACGTCTCGC ATGAACTGAG GACGCCTCTC AGCATGTTGC AGGGATACAC GGAGGCGCTT
CTGGACGACA TCTCGGATGA TCCCGACATG CGCCGAGAGC TGACCGAGAT TATTCACGAT
GAAACGCTGC GCATGAAGCG CCTCGTCAAT GATCTCCTCA ACCTCGCGCA GCTGGAAAGC
GGACAATTCA AGCTCCACTT CGCCCGCGTC GATCTCACGC AGGTCATGCG ACGCGTGGCG
CGCAAATTTC AGGCGCTTGC GAGCGACGAG GACCATCTGA CGTTCGAAGT CTCCATCCCG
GATCATCCAG TCATGGTCGA CGGCGACGAG GATCGCCTGG AGCAGGTCTT CACGAATCTG
CTCGACAATG CATTTCGGCA TACGGCACAG GGTACCATTC GTTTTGAACT GGATATTCGC
CACGACTATG CCTACGTGCG CGTGGCCGAT ACAGGCAGCG GCATACCGGA AGAGGATGTG
CCCTACATTT TCGAGCGCTT CTACAAGGCT GACAAAGCCC GCACGCGGTC GCGGTCTGGA
ACCGGCCTCG GTTTGGCCAT CGCCCGCCAA CTGGTGATTG AGCATCGCGG CGAGATCCTT
GTGGAAAGCC ACCTCGGAGA AGGCACGACG TTCACGGTGG TCTTGCCACT TGCTTCTCCG
AACGATCACG GCGAAGGAGA GAGCGTCTCA TGA
 
Protein sequence
MIPNSIVAKM WLTIVGMVFV IQALLSVLLQ QVFNKYIVTR EEASLTQLAL TIESVLATAT 
DRSIKEQVAS DIAKRVERAT VVYGIPYTAN AALKAAYDAM TPAERQALSR GQPVTLRGAL
GKVNRLTVYV QIPSARSPQP GMLAVSQDTS VLDEPLREIR NMVLFDTVLG VILATGFAFV
ISKNLSRPLV DMTRAAEEMA RGHYRQRVRV VTKDEVGRLG HTFNALARQL AETIEQLSME
REGLQRILSS LQDGVVATDL DGRVVLANPP AKRHLRHLSV AERGIVDEER LPDRLMSLWV
RVREQQDAVY REDTWDGRTI GITMLPLYET DGTTLRGALC VLRDITEERR LDRLRKDFIA
NVSHELRTPL SMLQGYTEAL LDDISDDPDM RRELTEIIHD ETLRMKRLVN DLLNLAQLES
GQFKLHFARV DLTQVMRRVA RKFQALASDE DHLTFEVSIP DHPVMVDGDE DRLEQVFTNL
LDNAFRHTAQ GTIRFELDIR HDYAYVRVAD TGSGIPEEDV PYIFERFYKA DKARTRSRSG
TGLGLAIARQ LVIEHRGEIL VESHLGEGTT FTVVLPLASP NDHGEGESVS