Gene Aaci_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1713 
Symbol 
ID8425224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1778164 
End bp1779144 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content56% 
IMG OID645027819 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003185114 
Protein GI258511680 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID[TIGR01481] catabolite control protein A 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.117717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTTA CGATATACGA TGTTGCGAGA GAAGCAAAGG TCTCAATGGC GACTGTGTCC 
CGCGTGATCA ACGGTACGGC TGTCGTCAAA GAGGATACCA AGAAAAGAGT GTTGGAGGCG 
ATTGCAAAAC TGGGATACCG GCCGAACGCG GTGGCACGGG GACTTGCCAG CAAGCGGACT 
CGCACGATTG GCGTGATCGT GCCGGACGTT TCGGCGGCGT TTGTGGCAGA GATGGTTCGG 
GGGATCGAGG ACATCGCGAA CATGTATGAT TACAACATTC TCCTCGTCAA CTCGGATGCT 
CAGGTGGATC GCGAGGTCAG TTTGATTGGA ACAATGTGGG AGAAACAGGT CGATGGAATC 
TTGTACATGA CGAACGTTCT CACGTCACGT GAGATCGACG CGTTTGAGGA AGCGCAGATT 
CCGGTTGTGC TCTGCGCGAC AGAAGATCCA GAGCGACGGA TCCCGTCGGT GAATATCGAC 
AACTATCGCT CGGGGCGGGA TGCGGTGAAC TTCTTGCTCC AGAAGGGTTG CAAGCGTATC 
GGCTTTATCA CGATGGACGA AGGGTTCTCG GTGGTGGCGG ATCGGCGGTT GCAGGGTGCC 
CAGAATCGGA TGCGCGGGCA GGAGCTTCAC GTCATTCGAA CGGGGCGCGG GCGCTACGAG 
ACGTCTCTTC CCGTCATCCG TGCGTACTTC GAGGAGCACG ACCTGGACGG TGTGGTTGCG 
GCCTCGGACG AATTGGGTCT GGCTGCGATT CATGCCGTGC AAGATATGGG GAAATCAGTG 
CCTGACGATG TCAAGGTGAT CGCGTTTGAC AACACACGCC TCGCTGTGAT GGTGCGCCCT 
GAGATGACCG TGATCGCGCA ACCGATGTAC GACTTCGGTG CGGTGTCGAT GCGATTGCTG 
ACCAAGCTCT TGCAAGATGA GCCGGTGGAT AACTACACCG TGATTTTACA GCACAACATC 
GTTGAGCGAG CCTCCACGTG A
 
Protein sequence
MPVTIYDVAR EAKVSMATVS RVINGTAVVK EDTKKRVLEA IAKLGYRPNA VARGLASKRT 
RTIGVIVPDV SAAFVAEMVR GIEDIANMYD YNILLVNSDA QVDREVSLIG TMWEKQVDGI 
LYMTNVLTSR EIDAFEEAQI PVVLCATEDP ERRIPSVNID NYRSGRDAVN FLLQKGCKRI 
GFITMDEGFS VVADRRLQGA QNRMRGQELH VIRTGRGRYE TSLPVIRAYF EEHDLDGVVA 
ASDELGLAAI HAVQDMGKSV PDDVKVIAFD NTRLAVMVRP EMTVIAQPMY DFGAVSMRLL 
TKLLQDEPVD NYTVILQHNI VERAST