Gene Aaci_1713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1713 
Symbol 
ID8425224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1778164 
End bp1779144 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content56% 
IMG OID645027819 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003185114 
Protein GI258511680 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID[TIGR01481] catabolite control protein A 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.117717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGTTA CGATATACGA TGTTGCGAGA GAAGCAAAGG TCTCAATGGC GACTGTGTCC 
CGCGTGATCA ACGGTACGGC TGTCGTCAAA GAGGATACCA AGAAAAGAGT GTTGGAGGCG
ATTGCAAAAC TGGGATACCG GCCGAACGCG GTGGCACGGG GACTTGCCAG CAAGCGGACT
CGCACGATTG GCGTGATCGT GCCGGACGTT TCGGCGGCGT TTGTGGCAGA GATGGTTCGG
GGGATCGAGG ACATCGCGAA CATGTATGAT TACAACATTC TCCTCGTCAA CTCGGATGCT
CAGGTGGATC GCGAGGTCAG TTTGATTGGA ACAATGTGGG AGAAACAGGT CGATGGAATC
TTGTACATGA CGAACGTTCT CACGTCACGT GAGATCGACG CGTTTGAGGA AGCGCAGATT
CCGGTTGTGC TCTGCGCGAC AGAAGATCCA GAGCGACGGA TCCCGTCGGT GAATATCGAC
AACTATCGCT CGGGGCGGGA TGCGGTGAAC TTCTTGCTCC AGAAGGGTTG CAAGCGTATC
GGCTTTATCA CGATGGACGA AGGGTTCTCG GTGGTGGCGG ATCGGCGGTT GCAGGGTGCC
CAGAATCGGA TGCGCGGGCA GGAGCTTCAC GTCATTCGAA CGGGGCGCGG GCGCTACGAG
ACGTCTCTTC CCGTCATCCG TGCGTACTTC GAGGAGCACG ACCTGGACGG TGTGGTTGCG
GCCTCGGACG AATTGGGTCT GGCTGCGATT CATGCCGTGC AAGATATGGG GAAATCAGTG
CCTGACGATG TCAAGGTGAT CGCGTTTGAC AACACACGCC TCGCTGTGAT GGTGCGCCCT
GAGATGACCG TGATCGCGCA ACCGATGTAC GACTTCGGTG CGGTGTCGAT GCGATTGCTG
ACCAAGCTCT TGCAAGATGA GCCGGTGGAT AACTACACCG TGATTTTACA GCACAACATC
GTTGAGCGAG CCTCCACGTG A
 
Protein sequence
MPVTIYDVAR EAKVSMATVS RVINGTAVVK EDTKKRVLEA IAKLGYRPNA VARGLASKRT 
RTIGVIVPDV SAAFVAEMVR GIEDIANMYD YNILLVNSDA QVDREVSLIG TMWEKQVDGI
LYMTNVLTSR EIDAFEEAQI PVVLCATEDP ERRIPSVNID NYRSGRDAVN FLLQKGCKRI
GFITMDEGFS VVADRRLQGA QNRMRGQELH VIRTGRGRYE TSLPVIRAYF EEHDLDGVVA
ASDELGLAAI HAVQDMGKSV PDDVKVIAFD NTRLAVMVRP EMTVIAQPMY DFGAVSMRLL
TKLLQDEPVD NYTVILQHNI VERAST