Gene Aaci_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1709 
Symbol 
ID8425220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1774821 
End bp1775624 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID645027815 
Productspore cortex-lytic enzyme 
Protein accessionYP_003185110 
Protein GI258511676 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID[TIGR02869] spore cortex-lytic enzyme 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.233149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGG CGAAACGCGC AATCTCGGCA TGGGCACTCA TCATCGCCGC TTGGATGGCC 
GCGGAGACGT CCCTCGCGAC GCCCGCGATT CAGGCGTTCA CGGCGCGCAA TCTCATCTAC
GGGAGCACCG GGTACGACGT CGACGAACTG CAGGGGCGTC TCCACCTGCT GGGCTACTAT
TGGGGGCGCA TTGACGGCAT CTTCGGTTGG AAGACCTATT GGGCTGTCCG TACCTTTCAG
TACAATTTTG GCCTTCCGGT GACCGGCGAG GTCGACATGC GAACCAAGAT CATGCTGGTG
AAGGCGACGC CGAACTGGAA CTACAAGATG GACGTTCCCA GCGCTTCTTC GGGATCGCCG
TCCGCCAGCG CCGCACAGCC AGCGACAACC TCCGGTAACA GCGGCACCCT GATCTCTGGA
GACGGTTTCA CGCATGGGAT GGACAATCTG AGTGCGAGCG ACCTGAACCT CATGGCGCAC
GTCGTCTACG GCGAGGCTCG CGGGGAACCG TTTGAGGGCC AGGTGGCTGT CGCCGCGGTG
ATCTTGAACC GCTTACATGA CCCGAAGTTT CCCAAGTCCA TTCCGGCCAT CGTGTATCAG
CCGGGCGCGT TTGACTGCGT GAACGATGGA CAGATCAACC TTCAGCCCAA TCAAGAGGCG
ATGCAGGCGG TGATTGACGC GGTGAACGGA TGGGATCCAA CGCATGGCGC TCTGTATTAC
TTCAATCCTG CCAAGACGTC GAACGCCTGG ATGTGGGCGC AACCGGAGCT TGTCATGATA
GGTCATCACA TCTTCACAGT CTGA
 
Protein sequence
MSRAKRAISA WALIIAAWMA AETSLATPAI QAFTARNLIY GSTGYDVDEL QGRLHLLGYY 
WGRIDGIFGW KTYWAVRTFQ YNFGLPVTGE VDMRTKIMLV KATPNWNYKM DVPSASSGSP
SASAAQPATT SGNSGTLISG DGFTHGMDNL SASDLNLMAH VVYGEARGEP FEGQVAVAAV
ILNRLHDPKF PKSIPAIVYQ PGAFDCVNDG QINLQPNQEA MQAVIDAVNG WDPTHGALYY
FNPAKTSNAW MWAQPELVMI GHHIFTV