Gene Aaci_1708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1708 
Symbol 
ID8425219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp1773557 
End bp1774804 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content66% 
IMG OID645027814 
Producthypothetical protein 
Protein accessionYP_003185109 
Protein GI258511675 
COG category 
COG ID 
TIGRFAM ID[TIGR02889] germination protein YpeB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.283078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAAAT GGACGTGGTG GGCTGGGACG GCGGCGGCCG TGATCGCGGT GGGCGGCGCG 
GCTTTTGCGT GGGGCGATCA CGAGCGAAGC CGGGCACAGG CCATGGCGGC CATGGTGGAC 
GCTGGGTATT CGGGTGCTTT GCGCGCGGCG GTTGCGGACC TCGATGCGCT GCGCGCAGCA 
CTCGCTTCGG CCTCCATCAT GGCGGATCCG GAATCCTTTC GGCGGCATCT GGCGGATGTG 
GAGAAATACG CGTACGCGGC GCAATTGGAC ATGGCACGTA TTCCCGACGG AGGACCGGAT 
CATCGGGTGA ACCAGGAATT GCATCAGATC GACTTCGATG CCGCACATTG GGTGACGACA 
GATGCCGATC CGCACAGCGC GAGCGTACAG GATGCCTTGC GGCAAGCGTA TCAAACCGTG 
GCGCGGCTGG AGACGCAGCT CGAGCCGATT GCGTGGCACG CGGGGCCCGT TCTCGGTGGA 
AGGACAGGTA CCGAACTCGC GCCGGCCGTG CGCAATGCGC TTGCCCGGGT ACAGGCGAGT 
GTCGTGCCAT CGAGCGCTGC GTCGAAGCGC ACCCCGGCCT CTGCGACGAC GAAGGACCCG 
ACGCCTTGGA TTCGGCGAGC GGAGCAGGTG GTGGGCGGGA GCATCGACAA GGCGAAGGTA 
AGTGACGTCC GCGATCCGCG CAACGGTTCG TATGTCCTCG TGACGGGCGC CGTCATGGGT 
CGACCGGTGC GCATCGAGTT TGCGAGAACG GGCACGCTCG CCAGCTATCG ATGGACGCGC 
CCGACGGGGA AGCCTCGGGT GGATCTGGCG GATGCGGCCG GCATCGCGTC GCGTTGGTTG 
CAGCGGGTCG GGTTGTCGGA CATGGTGCGC ACCTACGCCA GCCAGGTGGA CGGGATCGCG 
CGGTTCACCT ATCAGCCCAT CGTGCAAGGT GTCCCGGCGC TGGACGCGAG TTGCAAGGTC 
GTGGTGGCGT TGGACGACGG CCAGGTGATC GGATTTTACG ATCGCGGCAA GTGGCCGCCC 
AAGACCCTGC CGCCCGCCCG GCATCCGCTG TCCGAAAGCG ATCTCCGCGC GCGCCTCGGT 
CCGCAGTTTC ACGTTCAGGA CGAGCGGCGC GTGCTGGCGG AGGATCCCAA CGGGAAATGG 
GTTCAAGCCG TCGCGTTTGA TGGCACCCTC GGCGGCAGCG ACGAGCCCTA CCGCGTCGTT 
CTCGACGTGT CCACAGGGCA CGAGTTGAGC ATCGAACGCT TGACATAA
 
Protein sequence
MRKWTWWAGT AAAVIAVGGA AFAWGDHERS RAQAMAAMVD AGYSGALRAA VADLDALRAA 
LASASIMADP ESFRRHLADV EKYAYAAQLD MARIPDGGPD HRVNQELHQI DFDAAHWVTT 
DADPHSASVQ DALRQAYQTV ARLETQLEPI AWHAGPVLGG RTGTELAPAV RNALARVQAS 
VVPSSAASKR TPASATTKDP TPWIRRAEQV VGGSIDKAKV SDVRDPRNGS YVLVTGAVMG 
RPVRIEFART GTLASYRWTR PTGKPRVDLA DAAGIASRWL QRVGLSDMVR TYASQVDGIA 
RFTYQPIVQG VPALDASCKV VVALDDGQVI GFYDRGKWPP KTLPPARHPL SESDLRARLG 
PQFHVQDERR VLAEDPNGKW VQAVAFDGTL GGSDEPYRVV LDVSTGHELS IERLT