Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1681 |
Symbol | |
ID | 8425191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 1751301 |
End bp | 1752365 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645027786 |
Product | Peptidoglycan-binding lysin domain protein |
Protein accession | YP_003185082 |
Protein GI | 258511648 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1388] FOG: LysM repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.86934 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCGTC GTTGGCAGGC CATCCTAGCT GGCGCGCTCG CGTTTGTCGC TGCGCTGGGA CTTTGGACAA GCGACCGAGC GAACCCGGCG CCGGCCGCCA CGGCGCCCGT AGCCGACGCG CGCACCCCGT TCCAGCGAGC GTCGAGTCTA TCCCTTTTGC CTCGGGTCGA ATGGGCAGCG AACCGGGCGC GTTCGGACGG ACCCTCTCAC ATGGACGCGA TCGACGTGAA ACTTGTGCAT CGGCCGGAGA CCGCCCTGGC CGCTCAGGCG GAGATGCACC ACGCGGCCGC GAGCGCGATG GCGGCCAAGC CCGTCCGAAC GACGCTCCTT TGCGTCCGCG CAGGGGAATG CCTGTGGACC ATCGCCGAAT CCCATCACAC AACCGTGGCC GAACTGGTGC AGTATAACCA CCTTCGCTCC ACGGTTCTTC ACGTTGGCCA GGTATTGCGC CTGCCCGCGG GCGCGCACCG GCCGTTCGCG TTGCCGAAGT CGCCGGAAGC GAGTTCCTCG TCCCTCGTGC CGAGCCTGAC CTACACCGTT CAACCGGGGG ACTCGCTTTG GGAGATCTCG AATATCTTTG GCGTCTCTGT CTCCGCCATC TGCAGCGCGA ACCACCTGAC CCAAACGGCC ATCTACCCCG GCGAACGGCT CGTCATTGAG CCTTCGAGCG CCTTCGGCGG ATCGCAGGCG CAAAGCGTGC TGTTGCGCGA AGCGCCGCCC TGGCTCATCC CTGTCTACAA GGCCGCCGGC GCGAAGTACG ATATTCCCTG GACCGTGCTC GCCGCCATCC ACAAAGTCGA GACGGATTTC AGCACGGACG GAGACATCGA ATCTTACGCC GGCGCCATCG GACCGATGCA GTTTATGCCG TCGACGTTCG CCATCTTCGG GGTACCTGCT CCAGGTCACA AGGTTGCGGA CATCCACAAC GTGGAGGACG CCATCTACTC GGCCGCCAAC ATGCTGCATC AGGAGAGATT CAGCTCGGAT CCGTATTACG CCATCTGGAT GTACAACCAT TCGGCGACCT ACGTCGAGGA CGTCTTGCAC CTGGCGGTCA CCTGA
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Protein sequence | MFRRWQAILA GALAFVAALG LWTSDRANPA PAATAPVADA RTPFQRASSL SLLPRVEWAA NRARSDGPSH MDAIDVKLVH RPETALAAQA EMHHAAASAM AAKPVRTTLL CVRAGECLWT IAESHHTTVA ELVQYNHLRS TVLHVGQVLR LPAGAHRPFA LPKSPEASSS SLVPSLTYTV QPGDSLWEIS NIFGVSVSAI CSANHLTQTA IYPGERLVIE PSSAFGGSQA QSVLLREAPP WLIPVYKAAG AKYDIPWTVL AAIHKVETDF STDGDIESYA GAIGPMQFMP STFAIFGVPA PGHKVADIHN VEDAIYSAAN MLHQERFSSD PYYAIWMYNH SATYVEDVLH LAVT
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