| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1676 |
|---|
| Symbol | |
|---|
| ID | 8425186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 1747633 |
|---|
| End bp | 1748673 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 645027781 |
|---|
| Product | peptidase M42 family protein |
|---|
| Protein accession | YP_003185077 |
|---|
| Protein GI | 258511643 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1363] Cellulase M and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTGA AGGAGCTGAC GGAGGCCTTC GGCCCGACGG GCTTTGAGGA CGAGGTGCGC
GGCATCGTCC GCCGCGAACT CGACGCCATG GGTTTATCGG TGCGCACGGA CGTCCTGGGG
AACGTGATCG CGTCCACAGG AGAACATCAT CCCGGCCCGC GGGTGATGCT CGATGCGCAC
ATGGACGAGG TGGGTCTCAT GGTGACCCAT ATCGGGGAAG GGCGAGAGGA GGGCGGGCTG
CTCCGGTTCC GACCGCTCGG CGGCGTGGAT CCCCGGGTGC TCGTGTCCAA GCCGGTGCTC
ATTGGGGAGC GGCGCATTCC GGGCGTCATC GGCGCCAAAC CGGTTCACCT GCAGCAGCCG
AGCGAGCGGG AGAAGCCCAT CCCGATGGAG AAACTCTACA TCGACATCGG CGCCCGCGAC
GCAGACGACG CCAGGCGCCA CGTGAAGCCG GGCGACCCGG TGGTGTTCGC CACCGCGTAC
CAAGAGCTTC CGCATCGGAT GGCGAAGGCG AAGTCGTTCG ACGATCGCGT CGGCTGCTAC
ATCCTGCTCG AGGCGCTGCG CCGGTGGAAG GGTGCTCTGC CGGTGTTTGG CGCGTTTACC
GTGCAGGAGG AAATCGGTCT GCGCGGCGCA CACGCGGCCG CGTACCAGAT TGAGCCCGAC
ATCGCCATCG CGCTCGAAGG CACCGTGGCC CACGACGTCG TCGGCACGCC CTCGCACGGT
CAGTCGACGG TGGTGGGCAA GGGCCCGGCC ATCACCGTGC AGGACGGACA GACCGTGGCG
AATCGGCGCT TCGCCGAGTT CCTCTGGGAA ACGGCGAAGG CGCGCAACAT TCCGGTCCAG
TGGCGCAGGG TCAAGGGTGG AACCAACGAT TTCGGCGCCA TTCACCGCGT CGGCAAAGGG
GTGCTGGGCG GCGCCATCTC GGTGCCTGTG CGGTACATCC ACGCTCCGAC GCAGGTGGTG
TCGCTCGACG ACGTGAGTCA TGCCATCGAT CTCGTGGTCG CGGTGCTCGA CGAGATCGCA
AAGGGAGGAT TTCGCCCATG A
|
|---|
| Protein sequence | MLLKELTEAF GPTGFEDEVR GIVRRELDAM GLSVRTDVLG NVIASTGEHH PGPRVMLDAH
MDEVGLMVTH IGEGREEGGL LRFRPLGGVD PRVLVSKPVL IGERRIPGVI GAKPVHLQQP
SEREKPIPME KLYIDIGARD ADDARRHVKP GDPVVFATAY QELPHRMAKA KSFDDRVGCY
ILLEALRRWK GALPVFGAFT VQEEIGLRGA HAAAYQIEPD IAIALEGTVA HDVVGTPSHG
QSTVVGKGPA ITVQDGQTVA NRRFAEFLWE TAKARNIPVQ WRRVKGGTND FGAIHRVGKG
VLGGAISVPV RYIHAPTQVV SLDDVSHAID LVVAVLDEIA KGGFRP
|
|---|
| |