Gene Aaci_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1650 
Symbol 
ID8425160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1719845 
End bp1720669 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID645027755 
ProductKu protein 
Protein accessionYP_003185051 
Protein GI258511617 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.475711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCGA TGTGGCGAGG ATCGGTGAGC TTTGGACTCG TGAACATCCC GGTGCGGCTG 
TACAAAGCGA CGGAGACAGG CGGGATTCAC TTTCGGCAGC TTCACAGGAC CTGTCGGACG
CCGATATCCT ACAGGAAGTT TTGCCCTCGT TGTCAGGTGG AAGTGAGCCA GGACGAGATC
GTTCGAGGAT TTGAATACGC GAAGGGCGAA TTCGTCGTGG TTGAAGACGA CGATCTCGCC
GCATTTCAAG GTCGCCGCGG GGAGACCATC GATCTCGTCC AGTTCGCCGA CGCGGGCGAG
ATCGACCCGG TGATGTTTCA GGGCGCGTAC TACCTCGCCC CCGAGGCGAG CGGGAAGAAG
GCGTACCGCC TGTTGTGGCA AGCGCTTCGG GCGTCGGGCC GCGTCGGCGT GGCCCGGATG
ACGCTGCGGA GCGCGGAATC GCTCGCCCTG GTGAGGGCGA GCGAGGCGGA TGGGAACGTG
TTGGTGGTGC ACGCGCTCGC CTGGCCGGAG GACGTGCGAT CGACCGGCGA ACTTCCGTAT
GTGCGGGAAG CTGTGGAGAT CGATGCGAAT GAGTTGGAAG TCGCGGAGAC CTTGATTCGG
CAACTGACCA AGCCGTTTGT GCCGAACGAG TATCGAGACG AGAGCAGGGC GCGGTTGGAG
GCTTGGATCG CCGAGCGGCG CGGCGAGGCC GGGACGGAGA GGCCGGGCGC CCCGGCGTCG
GGCGAGGTCG TGGACCTGAT GGAGGCGCTC AAGAAGAGCC TGCAGCTCGC CAAACAGGCG
GAGAAGCCTC AGGAGAGCAA GCGCAAGAAG CGGAAGACGT CGTGA
 
Protein sequence
MHAMWRGSVS FGLVNIPVRL YKATETGGIH FRQLHRTCRT PISYRKFCPR CQVEVSQDEI 
VRGFEYAKGE FVVVEDDDLA AFQGRRGETI DLVQFADAGE IDPVMFQGAY YLAPEASGKK
AYRLLWQALR ASGRVGVARM TLRSAESLAL VRASEADGNV LVVHALAWPE DVRSTGELPY
VREAVEIDAN ELEVAETLIR QLTKPFVPNE YRDESRARLE AWIAERRGEA GTERPGAPAS
GEVVDLMEAL KKSLQLAKQA EKPQESKRKK RKTS