Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1612 |
Symbol | |
ID | 8425122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 1684554 |
End bp | 1685270 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645027717 |
Product | LmbE family protein |
Protein accession | YP_003185013 |
Protein GI | 258511579 |
COG category | [S] Function unknown |
COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGAACC AGGGAACGTT GATGGTCGTG AGCGCGCACG CCGCCGACTT CGTGTGGCGG GCTGGAGGGG CCATCGCCTT GTACAGCGAA CGTGGCTGGA CGGTGCGCGT CCTGTGTCTC ACGTACGGCG AGCGAGGTGA GTCTGCGAGC CTGTGGAAGG AGGGCAAATC GCTCGAAGAA ATCAAGCGCA TTCGGCGCGA GGAAGCGGAG CGGGCTGCGG ACATCCTGGG CGCCGAGATC CGCTTCTTGG ATGTTGGAGA TTACCCCATC GAGGTGACGC CGGCGTTGCG AGATGCGCTT GTGCAGGAGT TTCGCAAGTA TCGTCCGGAC GTCCTGTTGT CGCATACGTT CGTGGATCCC TACAATGCCG ACCATCCGCG CACGGCCGAA CTCGTCCGCG AGGCAAGGAT CCTCGCGCAG GCGCACGGGT ATCCGTCCGA ATACCCGCCC ATCGGCGCCC CGCAGCTGTA CTCGTTCGAA CCTCATCAGC CCGAACAGTG CCAGTTCCGA ATCGATCTTC TGTTGGACAT CACGCCGGTC TTCGACAAGA AGCGACAGGC GATGGAATGC ATGCAAGCCC AGGAGCATCT CTGGGCGTAT TACACGGATG TCGCCAAGCG CCGCGGTGTG CAGGCGGGCC GCAATTCCGG ACAACCCATC GTCTACGCAG AGGCGTATCA GCGCGTGTTT CCTTCCGTCG GAGGTGAGTT CGTGTGA
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Protein sequence | MQNQGTLMVV SAHAADFVWR AGGAIALYSE RGWTVRVLCL TYGERGESAS LWKEGKSLEE IKRIRREEAE RAADILGAEI RFLDVGDYPI EVTPALRDAL VQEFRKYRPD VLLSHTFVDP YNADHPRTAE LVREARILAQ AHGYPSEYPP IGAPQLYSFE PHQPEQCQFR IDLLLDITPV FDKKRQAMEC MQAQEHLWAY YTDVAKRRGV QAGRNSGQPI VYAEAYQRVF PSVGGEFV
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