Gene Aaci_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1612 
Symbol 
ID8425122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1684554 
End bp1685270 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content62% 
IMG OID645027717 
ProductLmbE family protein 
Protein accessionYP_003185013 
Protein GI258511579 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAACC AGGGAACGTT GATGGTCGTG AGCGCGCACG CCGCCGACTT CGTGTGGCGG 
GCTGGAGGGG CCATCGCCTT GTACAGCGAA CGTGGCTGGA CGGTGCGCGT CCTGTGTCTC
ACGTACGGCG AGCGAGGTGA GTCTGCGAGC CTGTGGAAGG AGGGCAAATC GCTCGAAGAA
ATCAAGCGCA TTCGGCGCGA GGAAGCGGAG CGGGCTGCGG ACATCCTGGG CGCCGAGATC
CGCTTCTTGG ATGTTGGAGA TTACCCCATC GAGGTGACGC CGGCGTTGCG AGATGCGCTT
GTGCAGGAGT TTCGCAAGTA TCGTCCGGAC GTCCTGTTGT CGCATACGTT CGTGGATCCC
TACAATGCCG ACCATCCGCG CACGGCCGAA CTCGTCCGCG AGGCAAGGAT CCTCGCGCAG
GCGCACGGGT ATCCGTCCGA ATACCCGCCC ATCGGCGCCC CGCAGCTGTA CTCGTTCGAA
CCTCATCAGC CCGAACAGTG CCAGTTCCGA ATCGATCTTC TGTTGGACAT CACGCCGGTC
TTCGACAAGA AGCGACAGGC GATGGAATGC ATGCAAGCCC AGGAGCATCT CTGGGCGTAT
TACACGGATG TCGCCAAGCG CCGCGGTGTG CAGGCGGGCC GCAATTCCGG ACAACCCATC
GTCTACGCAG AGGCGTATCA GCGCGTGTTT CCTTCCGTCG GAGGTGAGTT CGTGTGA
 
Protein sequence
MQNQGTLMVV SAHAADFVWR AGGAIALYSE RGWTVRVLCL TYGERGESAS LWKEGKSLEE 
IKRIRREEAE RAADILGAEI RFLDVGDYPI EVTPALRDAL VQEFRKYRPD VLLSHTFVDP
YNADHPRTAE LVREARILAQ AHGYPSEYPP IGAPQLYSFE PHQPEQCQFR IDLLLDITPV
FDKKRQAMEC MQAQEHLWAY YTDVAKRRGV QAGRNSGQPI VYAEAYQRVF PSVGGEFV