Gene Aaci_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1605 
Symbol 
ID8425115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1676308 
End bp1677198 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content68% 
IMG OID645027710 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003185006 
Protein GI258511572 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.97109 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGTT CCCGAGCCGC GGGCGTTTGG GCGGCCCGCG GACTGCTCGT CTTCGTCACG 
CTCGTTTGGG GCGCCACGTT CACGCTGACC AAACAGGCGC TCGCCGTCTT GCCGGTGCAC
GCATTTCTCA CCCTCCGCTT TGCTGCGGCC GCGATCGCCA CGCTGGGACT TGCGATCTTG
TCCCGCCGCA GGTCTTCGGC ATGGAACGAT GCGCGCACGT GGGCCGTCGG GGTGCTGGCG
GGCATCCCGC TCGGCGCGAG CTTTCTGCTC CAGACGGAGG GCCTTCGAAC CATCACGCCT
GGGCTCAGCG GATTTCTGAC GGGGCTGAAC GTCGTCATGG TTCCCATTCT GGCGAGCGCG
ATGACGAAGC GGCGGCCAGG CGCCCGCACC TGGTGGGGCG TGGCCCTGGC ATGCACCGGA
CTTCTTTTGA TGTGCGCCGG CACGCCGCTC GCCGGGCGAT TCCCAGGCGT CGCGGAGACG
ATTCTATGCG CGATGTGCAT TGCCCTGCAG ATTGTCGTCG TGGATAGGTG GGCGAAAGGG
CTCGACGCGT TCGCCGTCGC CGCGGTGGAA GTGTGGGTCA CGGCGCTCTT GACGTGGGCC
GCCGCCCTTT TCGCCGGACA ATGGGCGCCG CTCGCGGACG TGCGCACCTG GACGCAGCCT
GTCACGTGGG CGGCCGTGCT CGTCAACGGC CTTCTCGGCA CAGCGTTTGC GCTTTGGGCG
CAGAATTGGG CTCAGGAGCG CCTGTCGTCC GCGCAGACGG CCATCACGTT CGCGCTTGAG
CCCGTCTTCG CCGCGGCCAT TGGGTGGATG GTGCTTGGCG AGGCCATGAC GTGGCCCGGG
ATCCTCGGAG GACTTTTGAT TGTCGCGAGT ATGGCGGTGG CGCCGGCGTA A
 
Protein sequence
MQRSRAAGVW AARGLLVFVT LVWGATFTLT KQALAVLPVH AFLTLRFAAA AIATLGLAIL 
SRRRSSAWND ARTWAVGVLA GIPLGASFLL QTEGLRTITP GLSGFLTGLN VVMVPILASA
MTKRRPGART WWGVALACTG LLLMCAGTPL AGRFPGVAET ILCAMCIALQ IVVVDRWAKG
LDAFAVAAVE VWVTALLTWA AALFAGQWAP LADVRTWTQP VTWAAVLVNG LLGTAFALWA
QNWAQERLSS AQTAITFALE PVFAAAIGWM VLGEAMTWPG ILGGLLIVAS MAVAPA