Gene Aaci_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1603 
Symbol 
ID8425113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1674168 
End bp1675184 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content63% 
IMG OID645027708 
ProductN-acetylglucosamine-1-phosphodiester alpha-N- acetylglucosaminidase-like protein exopolysaccharide biosynthesis protein 
Protein accessionYP_003185004 
Protein GI258511570 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4632] Exopolysaccharide biosynthesis protein related to N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.530926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATCGGA GACCTCATCG GACCGCCCGC GTTCACGAAT CGGAGGCCAA GGAGAAGCCC 
AAGCGGCGCC GTGGATGGTT GGGCGTGATT GTCGCCACAG CGCTGTACGC CTTCGTGTCG 
TCGTCGCTCT TGGTCTTTCA TGGGCCCTTT CCTGCGCTTC GCACGTACGT GATCGACACA 
CTGGACGAAA CGCGGCACGG TTATTTGCTT CGCCCGCTGT CGCTCTACAC GCTTCCCGAG 
TCGGTCATCG CGGATCACGC CTTGAGCGGC AGCCTTGTAT CGGACACGCT GCCCATCTCG 
GACATCGTGA GCCGCGACTT CAACAACGCG GATAACTCCA TTCATCTGTA TACCTATCAC 
GGCAGCACGT TCACGGCGTA CATCCTCGTG GTGGACAACC CGAAGCGCGT GCGGGTCGCG 
GTGACGAAGT ACATCGGCGA GCGGGGTGAG ACGGTTCCGC AGCTTGTGCA GGACGCGGGC 
GCCGTGGCCG GCATCAACGG CGGAGCGTTC GCGGACAGCA ATCAGCAGGG TACCGGCGCG 
CTGCCGCTCG GCATCACGAT GGTCGACGGG CGCGTGATCA CGGGGGCGGA CAGCACTGCT 
AAGTATCCAG AAATCGGATT TACGAGCGGC GGCCAGATGA TCGCTGGGGA TTACTCTCTG 
GCCGATCTCG AGAAGCTGCA CGTCACGCAG GCCCTCAGCT TCGGACCCGT GCTCGTGCTG 
AACGGGCAGC CTGTGCAGGT CCCGGATCAG GGACTCAACC CGCGCACCGC CATCGGACAG 
ACGGCCGACG GGAAGGTGAT CATGGTGGTG ACGGACGGGC GAGGACAGTT TGGTCATCTT 
GGCGCTTCGA TGGCCGACAT CACGGCCATC ATGCTCCAAT ACCACGCCGT GATCGCCGCG 
GATTTGGACG GCGGTTCGTC CACGACCATG GTGTACAACG GCCGGATGGT CAACACGCCG 
GTGGACCTCA CGGGCGCGCG CAGCGTAGCG ACCGCGTTCG TCGTCATGCC GAACTGA
 
Protein sequence
MDRRPHRTAR VHESEAKEKP KRRRGWLGVI VATALYAFVS SSLLVFHGPF PALRTYVIDT 
LDETRHGYLL RPLSLYTLPE SVIADHALSG SLVSDTLPIS DIVSRDFNNA DNSIHLYTYH 
GSTFTAYILV VDNPKRVRVA VTKYIGERGE TVPQLVQDAG AVAGINGGAF ADSNQQGTGA 
LPLGITMVDG RVITGADSTA KYPEIGFTSG GQMIAGDYSL ADLEKLHVTQ ALSFGPVLVL 
NGQPVQVPDQ GLNPRTAIGQ TADGKVIMVV TDGRGQFGHL GASMADITAI MLQYHAVIAA 
DLDGGSSTTM VYNGRMVNTP VDLTGARSVA TAFVVMPN