Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1602 |
Symbol | |
ID | 8425112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 1671827 |
End bp | 1674040 |
Gene Length | 2214 bp |
Protein Length | 737 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645027707 |
Product | protein of unknown function DUF893 YccS/YhfK |
Protein accession | YP_003185003 |
Protein GI | 258511569 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.517222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCCGCG CCCCTGGCAA GGTGGCTGCG GCCCACTTTG CCAAGCGAGG GAAGAGGGGG TCGCATTTGA TTCGCAGGCG GACGTGGCGA TCGCTGCACA GCGTGATCGA GCGAGACCGC ACGTCTCTGC GCGTGCTCCC AGGCCTGCGC AACGGCGTCG GGATCCTCAT TCCGCTCGCG TGGGGTCTGA ATTCGGGCCA TTTGCTGTCG GGTATCGGCG TCGCCGTCGG CGCGCTGGTC GCCGGATTCG CGGGCAATGC GGGAACCGCG CGTCGCCGCC TGCGCACGAT GCTGTTTGCC ACCGCGTGGA TGAGCGTCAC CACGTTCATC GGCGCCTTGG CGGGCCACCG CGCGTGGCTC ATCGTGTTCG TGGCCGCGCT GAGCGGCTGG CTGTCAGGCA TGATGCTCGG CGTGAGCCAA CCGAGCGGAC AGGTGGGGCT CCTCGCCACG AACGCCCTGA TTCTCATCTC CACAAGCCCG CAGTCGGTAT CCGGCGCGCT GTACCGCACG TGCCTCGTCG CATGCGGTGG TTTGCTTCAA ACGGCCCTCA TGTTGGCGGT CGATCTCGTC AGCCCTCAAA GCGCCGAGGC CCAGTCTGTC TCGAAAGTGT ATCGGAAGCT CGGCGCGTAC GCCGCGTCCC CCTCGCGCCA GGCGGATCTC GAGTTGGCCG CGTCGCTCGT CGAAGCGAGC GATCTGCTTC GAGACTCGTA CATGCCGAAG CGACACCGTT TCCGCCTCTA CCGACTGCTC GATGGCGCGG AACAAATTCG CATGTACGTG GTGGCGCTCG CCGAAATCGC CCGCGGCAGG GCCTACGCCC AGGAACTCGG GGACGCGGTC TTCGCCGGAG ACATCCTTCG CCAGTGCGCG CCCATTTTCT CCGCGCTGGG CGACCACGTG TGGCTCATCG CGCAGGGAGA CAAGCGGGCT CAACCTCTCA TGTACATCCT CGAGCGCGCT TCGGCGGAAC TCTCCGCCAT CGCTCAGTCG GCGCAGGGCG TCGAGCGCAA GGAGGAGACG GCGGCGCACG TCGAGGCCGT GGCGCGTTCC CTGATGGCCC TCAGGGACGA TCTCGTCCAA CCGGGCGTGC ACGCCTTGCC GCCGGAGGCG CTCGAGTCAA CCGCTTCGAA GATCAAGCAG GCCTGGCAGG CACTTCAAAG CCACCTAACG TGGGACTCTG CCATCTTCCG CCACGCGTTG CGCGTCGCCA TCGCCGTCGG CATCGGCGAA ACGCTCGCGG TCGCATTGCC CTGGTCGCAC GCGTACTGGG TGCCGCTCAC GGCCAACATC ATTCTTCGTC CGGACTTCAC GAGCACGTTC ACGCGCGGGA TCGCCCGCGT GCTTGGGACG ATGGGGGGCA TTCTGCTCGC GACGCTGCTG CTCGTGGCCG TGCCGGATCG CACAGGGATG TTTGCGAGCG CGTGCATCGT GGTCTTCGGA TCGCTCATGT ACATGTGGGT GACGTACAAT TACGCGCTCT TCAGCTGTGC GCTGACCGCG CTGATGGTCG TTTTGCTCTC CCTTTTCGAG CGACAGGCGC CGATTCCCAC CATGGCGGAT CGGATGCTGG CGACGCTGGT CGGCAGCGCG CTCGCCATCC TCATCTACTT GATGTGGCCG ACCTGGCAGC ATCAGCAGGT GAACCGCGCG CTCGCGCAGG CTGTGGAGCG AGAACGAGAC TATTTTCGTG GCGTCTTGGG CGTGTTCGCA GAGGGCGGCA AAGGATCGCC GCGCAGACTC GCGCGCGAGC GCCAGGCGGT GCGCGTATCG AGGACGAACG CAGCGGCCGC CGTTCGCCAG GTGCTCGCGG AACCCGTCGC GCCACCGCTG CACGCGCACA TCATGGTGGC CATCTTGGTG GGCATGCACC GTTTTTCGGA CACCTTGCTG TCGCTCGAGG CCTACACGTG GGAAGGCAGG GCCGAACGAC CGTTGACGAA GGAGGAACAG GAGATCGCGC TGTGGATCGA TCGCGCCCTG TCCTCGCTGG CGGACGAGTT GAGAAGAGGG ACGGGTGAGA TTGTCATCGA TCCGTCGGGT GAACTGTGGC ACCAAGGGAG CGTCCGCCGT CATGTCGAGG CGATGGAGGT CAACTGGCGC ACGTTGGACG TGATCGCGCG GACGGTGGTA CGACTCTACC ACGTGATCCA AACGTTGGCT CGTCTGACGC ATGAGATCGA TGCCAGTCCA CCACAGAAGG CCCCGCCATC CTAG
|
Protein sequence | MGRAPGKVAA AHFAKRGKRG SHLIRRRTWR SLHSVIERDR TSLRVLPGLR NGVGILIPLA WGLNSGHLLS GIGVAVGALV AGFAGNAGTA RRRLRTMLFA TAWMSVTTFI GALAGHRAWL IVFVAALSGW LSGMMLGVSQ PSGQVGLLAT NALILISTSP QSVSGALYRT CLVACGGLLQ TALMLAVDLV SPQSAEAQSV SKVYRKLGAY AASPSRQADL ELAASLVEAS DLLRDSYMPK RHRFRLYRLL DGAEQIRMYV VALAEIARGR AYAQELGDAV FAGDILRQCA PIFSALGDHV WLIAQGDKRA QPLMYILERA SAELSAIAQS AQGVERKEET AAHVEAVARS LMALRDDLVQ PGVHALPPEA LESTASKIKQ AWQALQSHLT WDSAIFRHAL RVAIAVGIGE TLAVALPWSH AYWVPLTANI ILRPDFTSTF TRGIARVLGT MGGILLATLL LVAVPDRTGM FASACIVVFG SLMYMWVTYN YALFSCALTA LMVVLLSLFE RQAPIPTMAD RMLATLVGSA LAILIYLMWP TWQHQQVNRA LAQAVERERD YFRGVLGVFA EGGKGSPRRL ARERQAVRVS RTNAAAAVRQ VLAEPVAPPL HAHIMVAILV GMHRFSDTLL SLEAYTWEGR AERPLTKEEQ EIALWIDRAL SSLADELRRG TGEIVIDPSG ELWHQGSVRR HVEAMEVNWR TLDVIARTVV RLYHVIQTLA RLTHEIDASP PQKAPPS
|
| |