Gene Aaci_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1580 
Symbol 
ID8425090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1645112 
End bp1645903 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID645027685 
ProductCof-like hydrolase 
Protein accessionYP_003184981 
Protein GI258511547 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACCA AGCAACGCGT CAAGATGGTG TTTCTCGACA TCGATGGAAC GCTGTTTGTG 
AACGGCCGGA TCGTGCCCAA AAGCGCCGCG GCGGTCGCTA AACTCATCGA AAACCAGATT
CCGGTCGCCG TGTGCACGGG TCGGAGCGTC ATTCACGCCC AACACGTGCA GGCCTCACTA
GGGATCCCAT ACGGCATCTA TTTTAACGGC GGTTTGGTGA AGGCCGGAGA TCGAGAGATC
TTTGCCCTGC CTTTCTCGCG CGAAGTGGTT CGAGGCATCC TGGAATCGGC GGAGCGCCGC
GGCATTCAGA CCATCATTCA CACGCACGAT CACGCCTTTA GCCTGCGGCC GATTCCACCG
GAATATCTGC CGGTCCTCGC GTCCTACGAC TTCCCGCCCA TCGCCTGCGA GCCGACGATG
GCCGATCGGC TGGACGAGAT CGGCGTGTTT CAGTTGAACG CGTTCATGAC CGCCGAGTGG
GACGACGTGT TCGAGCGCGA GTTTCCCGAA TGCTACGTGT ACCGCTGGCA CGAACAGGCC
GTCGACTTCC AGCGCCGCAA GTCGGATAAG TCCATCGGCG CGATGCACCT CCTCTCGTAT
CTCGGCATCT CACCTGAAGA CGCCGTGCAC ATCGGAGACG GAGGGAACGA CATCGGCATG
TTTCGCACCA TGGGATACTC CTTCGCCATG GGCAACGCCA GCGACGAGGT CAAGCGCGCG
GCCAAGCGCG TCACTTCGAG CGCCGACGAG GGCGGCGTCG CGGACGCTTT GGCCGAACTT
GGGCTCATCT GA
 
Protein sequence
MKTKQRVKMV FLDIDGTLFV NGRIVPKSAA AVAKLIENQI PVAVCTGRSV IHAQHVQASL 
GIPYGIYFNG GLVKAGDREI FALPFSREVV RGILESAERR GIQTIIHTHD HAFSLRPIPP
EYLPVLASYD FPPIACEPTM ADRLDEIGVF QLNAFMTAEW DDVFEREFPE CYVYRWHEQA
VDFQRRKSDK SIGAMHLLSY LGISPEDAVH IGDGGNDIGM FRTMGYSFAM GNASDEVKRA
AKRVTSSADE GGVADALAEL GLI