Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1564 |
Symbol | |
ID | 8425074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | - |
Start bp | 1627717 |
End bp | 1629297 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645027669 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_003184965 |
Protein GI | 258511531 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.683002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAGAA GCCGACAGTC GTTCTTGCAC GGCGCGGCCG TGCTCGCCTT CGCCGGCATC GTCACCCGCG TGATGGCGCT GGCCGTCCAG ATGGTCATGG CCCGAACGAT GGGTGCCCAG GGCTTCGGCC TCTTCCAGAC CATCAGTCCA CCGTACTTCC TGCTCGTGAC CCTCGCCACC TTTGGGCTCC CACCCGCGGT CTCCAAGGTG ATCGCAGAAA ATCTCGCCGT TGGAGACGTC GCGCGCGCGC GCAAGGCGTG GATCATGGCG AACGCGTGGA GCGCCGCTTC CGGCCTGGCC ATGGTGTGCC TCGCGTTTGC CCTGTCGCCC CACCTGCAGC GCTTCATGGA TCCTCGGGCC ATCCCCGCCT TTTTCGCGAT GGTCTTACGC ATACCCATTG TGTGCCTTTC TTCGGTGCTG AGCGGCTTTT ACATGGGCAT TCAAAATCAG ACGCCGCCTG CGCTCGCGTG GATCGTGGAG ACCACGGTGC GCGCCGCGGC GTCGGTGCCT CTCATGATCT GGATGAGCCC TTGGGGCGTC CGGTACGGCG CCCTCGCGCT CGTCATTGGC GGCGGCATGG GCGAACTTGC AGGATATCTC ACCATGCTCG GCACGTACGG GCTTCGCGAT CGCCGCCTGC TCGTGACCGT TCAGCGAACG GCGCGGCCTG CTCGCGGCGT CGTTCGCGAT CTCGCCCAAG TCGCCGTGCC GACCATGCTC TCCAACGTCT TGGGCGTGGT TGCGTTCGCT GCGGAGCCCA CCGTCATGTA CCAGGCGTTT CTCGAGGCCG GGGTGTCGCG GCGCGAGGCC ACCGCCATGT ACGGCGCCTT CGGCATGGCC ATGGAACTCC TGTTCATGCC GACCGTGCTG TCCGGGGCCA TCTCCTCCGT CATCGTCCCG GCCATCTCCG AAGCCAAAGC GCTCCACGAC GACCGGCTCG TCGCGCGCCG CATCGCCCAG TCCATCCACG CCGCCATGTT CGTCGCGCTG TTCGCCGCCG CGCTGTTCAT CGCGTCGGGC GAAGACGCCG CGACGGCGCT GTATCGAAAC CCGACCGCTG GACAGTTGCT CGCGTATCTC GCGCCATCGT GCCTGTTCTT TTACCTCAGC GATCCGCTCT TCGCCGTCCT CCAGGGACTG AACCGAGCGT TCGTCTCGAC CGTCATCACG TTTCTCTCGA GCGCCGTTCG CCTGGCGTGC ATCTACGAAT TCGTCGCCGC GGGACATCAA GGCATCCGCG GGCTCGCCTC GGCGGTGGCC ACGAGCGGCA TCGTCGCCGC GGTGCTCGGC ATGCTCGCCG TCAGGCGGTA TCACGATCTC GACCTTGATC TCAGCATGAG CGCCAAGATG GCCCTTGCCG CCGCCATCGC GTGGCTTCCG ATGGGCGCCG TGCAGCATCA CGCGGCCCTG CAGGCGGCGT GGATCCAGTT CGCACTGTGC GCCCTCGCCG GCATGACCAC GTACGTGATC TCCGCGATGT ACCTAGGGCT TGCCACCGTC GACGAGATCG CGCGGATCCC AGTGGTGGGC GAACCCCTGG CGCGCGCCAT GCGCCGCTTG CCGTATCTCG GCGCGCGCTG A
|
Protein sequence | MTRSRQSFLH GAAVLAFAGI VTRVMALAVQ MVMARTMGAQ GFGLFQTISP PYFLLVTLAT FGLPPAVSKV IAENLAVGDV ARARKAWIMA NAWSAASGLA MVCLAFALSP HLQRFMDPRA IPAFFAMVLR IPIVCLSSVL SGFYMGIQNQ TPPALAWIVE TTVRAAASVP LMIWMSPWGV RYGALALVIG GGMGELAGYL TMLGTYGLRD RRLLVTVQRT ARPARGVVRD LAQVAVPTML SNVLGVVAFA AEPTVMYQAF LEAGVSRREA TAMYGAFGMA MELLFMPTVL SGAISSVIVP AISEAKALHD DRLVARRIAQ SIHAAMFVAL FAAALFIASG EDAATALYRN PTAGQLLAYL APSCLFFYLS DPLFAVLQGL NRAFVSTVIT FLSSAVRLAC IYEFVAAGHQ GIRGLASAVA TSGIVAAVLG MLAVRRYHDL DLDLSMSAKM ALAAAIAWLP MGAVQHHAAL QAAWIQFALC ALAGMTTYVI SAMYLGLATV DEIARIPVVG EPLARAMRRL PYLGAR
|
| |