Gene Aaci_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1562 
Symbol 
ID8425072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1625117 
End bp1626616 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content61% 
IMG OID645027667 
ProductGerA spore germination protein 
Protein accessionYP_003184963 
Protein GI258511529 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.791927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACAGT CGGCCGAGCC CCTGGTGAGC CAGCCCATCA GCCGGACACT GGAGCACAAC 
GTCAATTATA TTAACCAGCT CCTCGGCATC GGCACCACGT GGGACATCAT GGCCAAGCCC 
TTCCGGTACG GCCGCCTGAA CATGATGTCG TACGTGACCA ACGGCTTCTT TCTCACGATG 
AACGTCGTCC TCGTGCTCGA CAGCTTTCAC CGAAACGTCG AGGCGTTTGA GCGCGAACAC 
GAGGGTCAGA CCTACGACAT CGAGGAATTG GTCTTCTACC TGAACACGCA CATCGATTTC 
GTGCAGGTGC AGGTGATCAA TCAGATGTCG GACGCGGTCC GCTTCATCCT CTCCGGGCCG 
CTCGTGACGT TCATCGACGG GTACGACAAG GTGCTCGTCG TCGATACCCG CGTGTATCCG 
ATGCGCGGGA TCGAGCCTCC CATGATCGAG CGCGTGGTCC GCGGAAACCA CGACGGATTC 
ACCGAGACCA TGCTCATGAA CACGACGCTC ATCCGCCGCC GCCTGCGGGA TCCGCGCCTT 
CGCAACGAGC TGTATCAGGT GGGCGACCGC GGCCAGACCG ACGTCAGCCT CATGTACCTG 
AAAGATGTGG CCGATGAGGA AACGGTGTCG GCCATCCGCG AGCTTCTCCG CAGCGTCAAG 
ACGGGCGGCA TGATGATGGG CGAACAGCAG TTGGTCGATC TCATCGGCAA GGTGAAGTGG 
AATCCGTATC CCATCGTGCG CTATACGGAA CGGCCGGACG TCGCGGCCAC GGCGCTCATC 
GAGGGGCATG TCGTGATCGT CGTCGACGCC ACCGCCGAGG TGATCATCGC GCCCACGACC 
TTCTTTCAAC ACATTCAGCA TCCGCAGGAA TACCACTCGT TCCCCCTCGT GGGCACGTAT 
CTGCGCTGGA TCATCGTCAT CTCGGTCTTC ATGAGCGTGT TTCTGCCGGG CATCTTCATG 
TTGGCGAATC AGCACCCGGG GCTGCTTCCG TCCTGGGCGA AGTTCTTTAT GGCAAGTCGA 
AACGATCCGC TGCCGCTCTG GGCGCAACTC CTGGTGGCGG AGTTCGCGCT CGACGTGCTT 
CGGCTCGCGG TCTTGAACGT GCCCGTCACG CTTTCGAATG CCATCGGCAT TGTGTCCGCC 
TTGCTGTTTG GCCAGTTTGC CACGCAGATT CAACTGCTCC AGCCCGAGGT GCTCGTCTAC 
ATGGGCTTCG TGATGTTGGC GCAGTACGCG ACCTCGTCGT TCGAGCTGGC GTCCGCCAAC 
CAGATGGCGC GCATCTGGAT CATGCTCTGG ACCGCGGCGC TCAATTGGGG CGGCTTCCTG 
CTGAGCACGG CATCCTGGTT CCTCCTGCTT CTGACCACCA AGTCCTTCGG CAAGCCCTAT 
TTGTGGCCGC TCATTCCGTT CACGTGGAGG GACGGGATGA GGGACGTTCT CATCCGCTGG 
CCGTCGAGCG ATTTGGGCGG CGTGCCGACC ATTCTCCGCA ATCGGCGGCG AGCGCGTTGA
 
Protein sequence
MRQSAEPLVS QPISRTLEHN VNYINQLLGI GTTWDIMAKP FRYGRLNMMS YVTNGFFLTM 
NVVLVLDSFH RNVEAFEREH EGQTYDIEEL VFYLNTHIDF VQVQVINQMS DAVRFILSGP 
LVTFIDGYDK VLVVDTRVYP MRGIEPPMIE RVVRGNHDGF TETMLMNTTL IRRRLRDPRL 
RNELYQVGDR GQTDVSLMYL KDVADEETVS AIRELLRSVK TGGMMMGEQQ LVDLIGKVKW 
NPYPIVRYTE RPDVAATALI EGHVVIVVDA TAEVIIAPTT FFQHIQHPQE YHSFPLVGTY 
LRWIIVISVF MSVFLPGIFM LANQHPGLLP SWAKFFMASR NDPLPLWAQL LVAEFALDVL 
RLAVLNVPVT LSNAIGIVSA LLFGQFATQI QLLQPEVLVY MGFVMLAQYA TSSFELASAN 
QMARIWIMLW TAALNWGGFL LSTASWFLLL LTTKSFGKPY LWPLIPFTWR DGMRDVLIRW 
PSSDLGGVPT ILRNRRRAR