Gene Aaci_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1558 
Symbol 
ID8425068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1621042 
End bp1622529 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content65% 
IMG OID645027663 
ProductGerA spore germination protein 
Protein accessionYP_003184959 
Protein GI258511525 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTGC AGAAAGATGA CATGGCGCGG AGGGCAGTGG ACGTGGCGAG CGAAATCGCA 
AAACGCCTCG AGCCGTGTCC GGACCTCCGT GTGCAACCCT GGTCGACGCA GCGCGACACG 
GGCGTCGCCG TTTGGCTCGA AGGTCTGGTG GACGCCGATA AGCTGCAGGA GGCGCTGCTC 
GCCCTGCGTA ACGCGGGGGC AGCACGTGGG CGGCGGGAGA TCCCGCGTCC GGGTGTCGCG 
ACGGAGGAGG TCGGGACCAT CTCCGCCGCC GTTCGGGCTG TCCTCGACGG ATGCGCGGTG 
ATCGCTCGAG ACGGGGCAAG TTCGGCACAG GCATGGCGGC TCGATCGAGT GCCGGCCAGG 
TCCGTGGATC GCTCTGAGAA CGAACCCACC CTACACGGCC CGCAGGAAGC GTTCATCGAA 
AGCTTGTCCG TCAATCTGGC CATGGTGCGC AAGCGCCTGA AATCGCCGCG GTTGAAGATT 
GAGACGTTCA CGGTCGGCGA GACGTCGCCG TGCGAGATTG CGATCCTGTA TGAAGAAGGC 
GTGGTGAAGT CCGACCTGCT GCGCGAAGTT CGGAGACGCA TCGCGCAGAT TCGCGTCGAC 
TATGTCGCGG ACATCAACGA GGTGCGCGAG TTCATCAACG ACCCGCGCTT CTCGGTGTTT 
CCGACGACGG AGGAGACGGA GCGGCCGGAT CGCGTGGTGG CAGGGTTGAT GGAAGGGCGC 
GTGGCGATGA TGGCGGATGG ATCGCCGACA TGTCTCATGG TGCCTGTGAC CTTCGCCATG 
AATCTGAGTT CGCCCGAAGA CTACTACATG CACTATTCGC TTGCCCTTCC GCTTCGCCTC 
CTGCGGCACC TGATGTTCTG GGGCTCTGTG CTCCTTCCCG CACTTTACGT GGCCCTGTTG 
ACGTACAACC AGGACTTGTT GCCGACGCCG CTCTTGGTGA GCGTGGCGGC GCAACACTCG 
GGCATTCCGT TTCCGACGGT CATCGAGGCG CTGGGCATGA TGGTGGCCTT CGAGGCGCTT 
CGCGAGGCCG GAACCCGTTT GCCGCGGGCA GTGGGGCAAT CTGTGAGCAT CGTCGGCACG 
CTCGTGATCG GCGACGCGGC AGTGCGTGCT GGGCTCGTGT CCCCGGGCAT GGTGATCATC 
GTCTCGGCAA CGGGCGTGGC GTCGTTCACG CTGCCCGCCC TCGGCCTCGT GCAGGCGGCG 
CGGCTGCTCC AGTTTCCGTT CGTGCTGGCC GCGGGGCTGT TCGGTTTGTA TGGGGTGCTC 
ATGCTTGGCA TCGCGCTTTT GGGCCGCATG GCGTCCCTCC GATCGTTCGG CGTGCCGTAT 
CTCGCGCCCA TCGCCCCAAC TTTCATCCGC GATATGAAGG ACGTGATCAT CCGCGCGCCG 
TGGTGGATGA TGCAGGGCAG GCCGCGCCAG TTCGAACCGG TCGAGCACGA TCGCGTCCCG 
AAACATCCCG CGCGCAAGCG GGCGCCACGG TGGAGGTGGC GTCCGTGA
 
Protein sequence
MSVQKDDMAR RAVDVASEIA KRLEPCPDLR VQPWSTQRDT GVAVWLEGLV DADKLQEALL 
ALRNAGAARG RREIPRPGVA TEEVGTISAA VRAVLDGCAV IARDGASSAQ AWRLDRVPAR 
SVDRSENEPT LHGPQEAFIE SLSVNLAMVR KRLKSPRLKI ETFTVGETSP CEIAILYEEG 
VVKSDLLREV RRRIAQIRVD YVADINEVRE FINDPRFSVF PTTEETERPD RVVAGLMEGR 
VAMMADGSPT CLMVPVTFAM NLSSPEDYYM HYSLALPLRL LRHLMFWGSV LLPALYVALL 
TYNQDLLPTP LLVSVAAQHS GIPFPTVIEA LGMMVAFEAL REAGTRLPRA VGQSVSIVGT 
LVIGDAAVRA GLVSPGMVII VSATGVASFT LPALGLVQAA RLLQFPFVLA AGLFGLYGVL 
MLGIALLGRM ASLRSFGVPY LAPIAPTFIR DMKDVIIRAP WWMMQGRPRQ FEPVEHDRVP 
KHPARKRAPR WRWRP