Gene Aaci_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1542 
Symbol 
ID8425053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1599223 
End bp1600167 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content47% 
IMG OID645027650 
Producthypothetical protein 
Protein accessionYP_003184946 
Protein GI258511512 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.000000812437 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTGT CTAAAATTTC TCTTTGTGGT TTTTTGGCGA TCTTTGCAGC AATTCCGATG 
GCGGAACCAA CCGTAGCTTC AGCGGCAACG CATTCGAAGG TCTCTACGAT TTCAACCCAG 
GCATTGACTG CTTCCTCGGT ACAGACACTT CCTGACGGAG GTCAGGAGTA CATTTATTAC 
ATCAATGGTG TCAAGAATGT ATTCCCGGTA CCACCCAAAG GATTTAATCC GTTGACGGCA 
ACGGATGCAC AACTTCGAGA ATATGGGTTC CCGCCACGGC CTTCTGATCC CCAGAACCTT 
CAACAGTGGG AGCAGGAAAT GAGTCATTGG AAACGGACGC TTCCGCCCAA GGTGGTAATG 
ACAAATATTT CGCATCGTCT CATTCCGTAT AATATTTCAC ATCGTCTCGT TCCGTATAAA 
GGAATTACCG AGAACACTTC TGACGCGGAA CCAATCGTAG CTTCAGCGGC AGCGCATTCG 
AAGGTCTCTA CGATTTCAAC CCAGGCATTG ACTGCTTCCT CGGTACAGAC ACTTCCTGAC 
GGAGGTCAGG AGTACATTTA TTACATCAAT GGTGTCAAGA ATGTATTCCC GGTACCACCC 
AAAGGATTTA ATCCGTTGAC GGCAACGGAT GCACAACTTC GAGAATATGG GTTCCCGCCA 
CGGCCTTCTG ATCCCCAGAA CCTTCAACAG TGGGAGCAGG AAATGAGTCA TTGGAAACGG 
ACGCTTCCGC CCAAGGTGGT AATGACAAAT ATTTCGCATC GTCTCATTCC GTATACAGGG 
ACTGCCGAGA ATATTTCTGA AAGTGTATTC CAAACAAGTA ACTGGTCTGG TTACTACAAC 
TTTTCTAGTT ACAACGCTGG CGAATTACCA ACAGAACCCT TGGACAAATG CGCAGACTTA 
CAGCATATAC GGATACTGGA ATCCGATCGG TGCATTGGCC TATAA
 
Protein sequence
MNVSKISLCG FLAIFAAIPM AEPTVASAAT HSKVSTISTQ ALTASSVQTL PDGGQEYIYY 
INGVKNVFPV PPKGFNPLTA TDAQLREYGF PPRPSDPQNL QQWEQEMSHW KRTLPPKVVM 
TNISHRLIPY NISHRLVPYK GITENTSDAE PIVASAAAHS KVSTISTQAL TASSVQTLPD 
GGQEYIYYIN GVKNVFPVPP KGFNPLTATD AQLREYGFPP RPSDPQNLQQ WEQEMSHWKR 
TLPPKVVMTN ISHRLIPYTG TAENISESVF QTSNWSGYYN FSSYNAGELP TEPLDKCADL 
QHIRILESDR CIGL