Gene Aaci_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1519 
Symbol 
ID8425030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1576164 
End bp1576979 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content56% 
IMG OID645027633 
ProductIntegrase catalytic region 
Protein accessionYP_003184929 
Protein GI258511495 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTCCGTC AGCTCGCCAA GGAAGGGTTT CCGGTCCCAG TGATTGCAAA AGCGTTAGGG 
CTGAACCGGA CGTACTGTTA CAGCCTGTTG AAGCCGCCTG TGCCAAAGCC GAAGCGGCCC
CCTGTGGACA AGGACGCTCT GGTCAAACAG TGGATTCGGA GACTGTGCGA GGAGTTCCCG
ACGTACGGAT ATCGGCGAAT CCAGGTCATG CTGCGTCGCC GATACAACCT GCGGGTGAAC
CATAAGCGGG TGTACCGGCT GATGAAGGAA ATGGGGCTGC TGGTGAAAGC GCCGAAGCGG
GGTGCTTCAC GAACGAAGCG GCGAGGCAAG ATACCGGTGA CTAGGTCCAA TGAGCATTTC
CAATGTGACA TGACCAAGGT GTGGTGCGGG AAAGACGGAT GGGGTTATCT GTTTGCCGTG
ATTGACGCCT ATGACCGAGA GATTGTGGGA TACTCGTTTT CCCGATTCTG TCGTACGGAG
GACTTGCTGA ATGCTGTGGA TAGGGCGCTG AATTATCGTT TCCCAAACGG CGTTCAAGGT
GCCGGTTTGA CGCTTCGAAC GGACAACGGC TGCCAGATGA CAAGTCGACG CTTCATCGAA
GCGATGAAAG CCTGCCAAAT CAACCACGAG CGGACAGGTT TCAACAACCC CGACGCTGAC
GGATACATCG AGCGATTCTT CCGGTCGCTG AAAGAAGAGG AGGTCTGGCT GCAGGAATAC
AGCAGCTTTG CCGAGGCGAA AGCGGGGATT GAATCGTATA TTCACTTTTA CAACACGGAG
CGCCCGCATT CTGCACTGGG TTATCGCTCG CCGTAA
 
Protein sequence
MVRQLAKEGF PVPVIAKALG LNRTYCYSLL KPPVPKPKRP PVDKDALVKQ WIRRLCEEFP 
TYGYRRIQVM LRRRYNLRVN HKRVYRLMKE MGLLVKAPKR GASRTKRRGK IPVTRSNEHF
QCDMTKVWCG KDGWGYLFAV IDAYDREIVG YSFSRFCRTE DLLNAVDRAL NYRFPNGVQG
AGLTLRTDNG CQMTSRRFIE AMKACQINHE RTGFNNPDAD GYIERFFRSL KEEEVWLQEY
SSFAEAKAGI ESYIHFYNTE RPHSALGYRS P