Gene Aaci_1430 details

Gene Information

• Locus tag: Aaci_1430
• ID: 8424937
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
• Kingdom: Bacteria
• Replicon accession: NC_013205
• Strand: -
• Start bp: 1481597
• End bp: 1483426
• Gene Length: 1830 bp
• Protein Length: 609 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 645027545
• Product: GTP-binding protein TypA
• Protein accession: YP_003184845
• Protein GI: 258511411
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000885386
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTACCA TTACGCCCGA TCGATTGCGA AACGTCGCGA TCGTCGCTCA CGTCGATCAC 
GGCAAGACCA GTCTTGTCGA TCAAATGCTT CGCCAATCCG GCCTCTTCCG CGACAACCAG 
CACATCGCGG AGCGGGCGCT CGACTACAAC GACCTCGAGC GCGAACGAGG GATCACGATT 
CTCGCGAAGG CGACGGCCAT CCCGTACGAG TCGTACCGCA TCAACATCGT GGATACGCCC 
GGTCACGCCG ACTTCGGCGG CGAGGTCGAG CGCATCCTCC GCATGGTGGA CGGCGTGCTT 
CTCGTGGTAG ACGCCTTCGA AGGCGTCATG CCGCAGACGC GCTTCGTCCT GGATAAGGCG 
CTGTCCGCCG ATCTCGTCCC GATTGTGGTC ATCAACAAGA TGGATCGGCC CAACGCGCGG 
CCCGCGGACG TGATCGACGA GGTGCTCGAG CTGTTCATCG ACCTCGGCGC GTCCGACGAG 
CAGCTCGACT TTCCGGTGAT TTACGCGTCG GCGCTCGAAG GCCGCGCGTC GACGGATCCG 
AACGACCTCG GCAACGATAT GCGGCCGTTG TTCGACGCGA TTGTCGCCCA CATCCCGAGC 
CCGCGCGTCG ACGCGGAAGG TCCCTTCCAG TGGCAGGCCA CCATCATCGA CTACGACGAA 
TACCTCGGGC GCATCGGCAT CGGGCGCGTC CATCGAGGCG AGGTCCGCCA AGGGCAGGCC 
GTGGTGCGCC TGCGCGAGGC GGAAGGCGCC CTCGAGGGGC GCGTGCAGAA GCTGTTTGTG 
TACCAGGGCC TGAGGCGCAT GGAGGTCGAA TCCGCATCCG CGGGTGACAT CGTCGCCATT 
GCCGGCCTTG CGGACATCAC CGTCGGCGAC ACGCTCGCGT CGCCGGATCG ACCCGAGGCG 
CTCCCGGTCA TCGAGATTGA CCAGCCGACG CTCGAGATGA CGTTCCACGT CAACGACAGC 
CCGTTTGCGG GCCGCGAAGG GCAGCACGTG ACGAGCCGAA AGCTGCGCGA TCGCCTGCAC 
CTGGCGATGG AGTCGGACGT CAGCCTTCAG GTCGAGGACA CCGACGACGC CGATGCGTTC 
CTCGTCAAGA GCCGCGGCGA ACTCCACCTC TCCATCCTCA TCGAGACGCT GCGACGGGAG 
GGCTACGAGC TCGCGGTATC GAAGCCGCGC GTGATCGTGC GCGAAGAGGC GGGCGAGCGC 
CTCGAACCCA TCGAAGAGCT CGTCGCCGAC GTGCCCGAGG ATGCGTCCGG CAGCGTGATT 
GCGGAAGTCG GGCTGCGAAA GGGCGAGCTC GTGGCCATGC ACCCGGTCGG CCAAGGCGGC 
ATGGTCAGGC TCGTCTTCCA GGTGCCAACC CGAGGACTCA TCGGGTTTCG CTCCCTCTTC 
CTTACGATGA CCCGCGGTTA CGGGATCATG CATCACCGCT TTCAGGCGTA CGCGCCGTGG 
CGGGGACCCA TCCAGGCGCG TCGGCAGGGC GTGCTCGTGG CGAGCGAGAC GGGGCTCGCG 
ACGGCGTACG CCATCAGCAA CCTCGAGGAC CGCGGGGTGA TGTTCATCAC GCCCGGCACG 
CCGGTGTACG AAGGCATGAT TGTCGGCGAG CACAATCGCG AGAACGACCT CGTCGTGAAC 
GTCACCAAAG AAAAGCATCA GACGAACATC CGATCCTCCA CGAAAGAGGA GACGGTGAAG 
CTGAAGGCGC CGCGCCTTTT GTCCCTCGAA GAGGCCATCA CCTACATTGA GGACGACGAG 
CTGTGCGAGG TCACGCCCCA GTCCATTCGG CTTCGGAAGA AAATCCTCAA CAAAAGCGAG 
CGAGAAAAGC TGAAGCGGCG CCAGGCGTGA 

 

Protein sequence

MRTITPDRLR NVAIVAHVDH GKTSLVDQML RQSGLFRDNQ HIAERALDYN DLERERGITI 
LAKATAIPYE SYRINIVDTP GHADFGGEVE RILRMVDGVL LVVDAFEGVM PQTRFVLDKA 
LSADLVPIVV INKMDRPNAR PADVIDEVLE LFIDLGASDE QLDFPVIYAS ALEGRASTDP 
NDLGNDMRPL FDAIVAHIPS PRVDAEGPFQ WQATIIDYDE YLGRIGIGRV HRGEVRQGQA 
VVRLREAEGA LEGRVQKLFV YQGLRRMEVE SASAGDIVAI AGLADITVGD TLASPDRPEA 
LPVIEIDQPT LEMTFHVNDS PFAGREGQHV TSRKLRDRLH LAMESDVSLQ VEDTDDADAF 
LVKSRGELHL SILIETLRRE GYELAVSKPR VIVREEAGER LEPIEELVAD VPEDASGSVI 
AEVGLRKGEL VAMHPVGQGG MVRLVFQVPT RGLIGFRSLF LTMTRGYGIM HHRFQAYAPW 
RGPIQARRQG VLVASETGLA TAYAISNLED RGVMFITPGT PVYEGMIVGE HNRENDLVVN 
VTKEKHQTNI RSSTKEETVK LKAPRLLSLE EAITYIEDDE LCEVTPQSIR LRKKILNKSE 
REKLKRRQA