Gene Aaci_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1417 
Symbol 
ID8424924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1467437 
End bp1467874 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content65% 
IMG OID645027532 
ProductCheD 
Protein accessionYP_003184832 
Protein GI258511398 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1871] Chemotaxis protein; stimulates methylation of MCP proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0653716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGCC CAGGTCGGCT GGTGACCACG GGCCTCGGGT CGTGCGTGGG TGTGGTGATC 
TACGATGCCG AGGGCCACGT GGCTGGCTTG GCCCACGTGA TGCTGCCCGA GAGCCCTTCG 
CCCGACACGA AGGCGCCGCA CAAGTACGCG GACACCGCCA TTGACTGGCT GATCCGCGAG 
ATTGTGCATG CGGGCGGGAG TCCTCTGCGC CTCCGCGCGA AGTACGCCGG TGGGGCGCAG 
ATGTTTCAAG GCGTGAAGAT GGAGACGCTT CGCGTCGGCG AGCGCAATGT GGAGGCCGTG 
AAGAAGCGGC TTGCGGAAAG AGGAATTCCT GTGATCGGAA GCGACGTGGG TGGACATCAA 
GGCCGGACCT TATGGTTTGA CTTGCCGTCC TGTATCCTCA CGGTGCGAAC GGCCAGGGGC 
GACATGCGCG CGCTTTGA
 
Protein sequence
MCGPGRLVTT GLGSCVGVVI YDAEGHVAGL AHVMLPESPS PDTKAPHKYA DTAIDWLIRE 
IVHAGGSPLR LRAKYAGGAQ MFQGVKMETL RVGERNVEAV KKRLAERGIP VIGSDVGGHQ 
GRTLWFDLPS CILTVRTARG DMRAL