Gene Aaci_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1402 
Symbol 
ID8424909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1453673 
End bp1454668 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content61% 
IMG OID645027518 
Productflagellar motor switch protein FliM 
Protein accessionYP_003184818 
Protein GI258511384 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTGAGG TCCTTTCCCA ATCTGAGATC GATGCCCTGC TCTATGCGAT TCGCACGGGC 
GAGATCGATC CTGCCGCCGA GCAACGCGCG AACGCCCATC CGCGCGTGCG GGTCTACGAT
TTTCGGCGCG CGATGCGGTT TTCGAAAGAC CATCTACGCG TGCTCCGGCG CATGCACGAG
CACTTTTGCC GGTTGCTCAC GAGCCAGCTC TCGGGGCAAC TGAGGTCGGT GCCGCAGATT
CAGGTGGAGT CGGTCGACCA AGTCCCGTAT GACGAGTTCA TTCGCTCGAT CCCGCCGCTC
ACCGTCCTGC AGGTCTACGA CATGCACCCA CTCGAGGGGC GCATGGTGAT GGAGATGAAT
CCGCAGGTCG TGTTCGCCAT GCTGGACAAA TACATGGGCG GGGACAGCGC GGGGCCGTAT
CGCGTGCGGG AGCTGACGGA CATCGAAGTC TCCCTGTTTC GCCGGTTGTT CGAAAACGTG
CCGTCCATCC TGGCCGAGGC TTGGAAGAGC GTGATCGACC TTGATCCCCA GTTCGTGTCG
TTGGAGAGCA ACCCACAGTT CTTACAGCTC ACTACCCCCA ACGAGACGGT GCTCGTGGTG
ACCATCAGCG TCCGCGTGGG AGAAACGACA GGTCTTATCA ATCTGTGCAT TCCGCACGTG
ACCATCGAAC CGGTTCTGTC CAAGCTGAGC AACCGGTATT ACATGGACCC GGCCTTTCAA
AGCGGCAGGC GGCAGGTGAA CGATGAGTTG CGCGCCAAGC TTCTCAGCGT TCCGGTCGAC
GTCCGGGTGG AAGTCGGGCA GGCGGAGCTG ACCGTGCGGG AGGTTCTCGA CCTGTGCGAG
GGCGACACCA TCGTGTTGCG CCAAACGATT CGCGATCCGG CGCTCGTCTA CGTCGATGGG
CGACCTGCGT TCTGGGGAAG CGTGGGGAAG CGAAACCGCG TGTATGCGGT GAAGATCGTG
GGCCAGTGGG AGGCGGATGC CGATGGTGGA CGATGA
 
Protein sequence
MSEVLSQSEI DALLYAIRTG EIDPAAEQRA NAHPRVRVYD FRRAMRFSKD HLRVLRRMHE 
HFCRLLTSQL SGQLRSVPQI QVESVDQVPY DEFIRSIPPL TVLQVYDMHP LEGRMVMEMN
PQVVFAMLDK YMGGDSAGPY RVRELTDIEV SLFRRLFENV PSILAEAWKS VIDLDPQFVS
LESNPQFLQL TTPNETVLVV TISVRVGETT GLINLCIPHV TIEPVLSKLS NRYYMDPAFQ
SGRRQVNDEL RAKLLSVPVD VRVEVGQAEL TVREVLDLCE GDTIVLRQTI RDPALVYVDG
RPAFWGSVGK RNRVYAVKIV GQWEADADGG R