Gene Aaci_1396 details

Gene Information

• Locus tag: Aaci_1396
• ID: 8424903
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446
• Kingdom: Bacteria
• Replicon accession: NC_013205
• Strand: +
• Start bp: 1451037
• End bp: 1451516
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 645027512
• Product: flagellar hook capping protein
• Protein accession: YP_003184812
• Protein GI: 258511378
• COG category: [N] Cell motility
• COG ID: [COG1843] Flagellar hook capping protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGGTCA ACCCAACTTT GTCTCTCAGC GCACCTGTAA ACGGTTTGTC CAGCGCGCAG 
ACGGCCGCGC AGAGCGGGAC CACGAGTTCT TCCAGTGCCA GCGCTTCGCA GACCGGAATG 
AACTCGCTGA ACGAAAACGA CTTCATGCAG CTTTTGGTCA CGCAGTTACA AAATCAGGAC 
CCGCTCAATC CCGTCGATAA CACGCAGATG CTCGCACAGT TGGCGCAGTT CAGCGCGCTC 
GAGGAGATGA CCCAGGTGGC GCAGACCGAT GCGCAGGTCC TGAGTGCCGT GCAAAACTTG 
GAGAGCGAGA TGAGCCTGCT GATGGCGCAC AGCCTCATTG GGGCGTCGGT CACGGTCCAG 
GACGCGAGTG GGAATCAGGT TCAGGGAACG GTGTCGTCCG TGACCATGAA TCAAGGCACA 
CCCCAAATCG TCGTCAATGG AACGTCGTAT CCGTTGACAC AGGTGGTTGG CATGGCGTGA 

 

Protein sequence

MAVNPTLSLS APVNGLSSAQ TAAQSGTTSS SSASASQTGM NSLNENDFMQ LLVTQLQNQD 
PLNPVDNTQM LAQLAQFSAL EEMTQVAQTD AQVLSAVQNL ESEMSLLMAH SLIGASVTVQ 
DASGNQVQGT VSSVTMNQGT PQIVVNGTSY PLTQVVGMA