| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1382 |
|---|
| Symbol | |
|---|
| ID | 8424889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1438355 |
|---|
| End bp | 1439668 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645027498 |
|---|
| Product | gid protein |
|---|
| Protein accession | YP_003184798 |
|---|
| Protein GI | 258511364 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
|---|
| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCATG TCACGGTCAT CGGCGCAGGA CTCGCGGGAT CGGAGGCAGC GTGGCAGGCT
GCGAATCGGG GCGCCAAGGT GACGCTGTAT GAGATGCGGC CGGTTCAGAT GACGCCTGCC
CATCACACCG ATCGGTTCGC GGAGCTGGTG TGCACCAACT CGTTGCGGTC CAACAGTATC
ACGAACGCGG TGGGGTTGCT GAAGGAGGAG ATGCGCAGGC TCGATTCGGT GATCATGCGG
GCCGCGGACG CCCACGCAGT CCCTGCAGGC AACGCGCTTG CCGTCGATCG CGACGGCTTT
TCGCAGCGGG TCACGGAACT CGTCTCACAG CATCCGAACA TCACGGTGGT TCGCGAGGAA
GTCACCGAGA TCCCGAAGGA CGGCGTCACG GTGGTCGCGA CCGGGCCTCT CACATCTCCG
GCGCTGTCGG AAGACATCCG CCGCCTGGTG GGGCACGGCG ATCTCTATTT TTACGACGCC
GCGGCGCCGA TTGTCACCAA GGAATCCATC GACATGTCGA AGGTCTTCTT TCAGTCGAGA
TATGATCAGG GGGATGCGGC GTACATCAAC TGTCCGATGA CCGAGGAGGA GTTCGAGGCG
TTCTATGACG CGCTCGTCCA CGCGGAGTGC GCGGAACTGA AGGACTTCGA AGAGGAACGG
TATTTTGAGG GCTGCATGCC CATCGAGGCG TTGGCGAAGC GCGGAAAGCA AACGCTGCTT
TTCGGCCCCA TGAAGCCCGT GGGTCTTCGC GACCCGAGGA CCGGTAGGCG TCCGTTCGCG
GTCGTTCAGC TCCGACAGGA CAACGCGGCC GCCACGCTGT ACAACATGGT GGGCTTTCAA
ACGCACCTGA AGTGGGGCGA GCAGAAGCGC GTGTTCCGGA TGATCCCTGG GCTTGAACAG
GCCGAATTTG TGCGATACGG GGTCATGCAC CGGAATACGT ATATCAACAG CCCAGTTGCG
CTTCTGCCCA CGTATCAGGC GAAGGCGCGT CCGACGCTGT TTTTTGCCGG CCAGATGACG
GGCGTCGAAG GGTACGTGGA ATCCGCGGCC TCGGGTCTCA TCGCGGGCAT CAACGCGGCT
CGCGTGGCGG CCGGCCAGGA CGCGCTCGTA TTCCCTCCGA CCACATCGAT GGGCAGCCTG
GCGCATTACA TCACGCATGC CTCGCCGCAA GGGTTTCAAC CCATGAACGC AACTTTTGGC
ATCTTTCCGC CGCTCGACCC GCCGGTCAAG GACAAAAAGG CTCGCTACGA GCGGTATGCG
GCGCGAGCGC TCGAGGATCT CCAGGCTTTC ATGAGGGAGT TGGAGCGGGT GTGA
|
|---|
| Protein sequence | MAHVTVIGAG LAGSEAAWQA ANRGAKVTLY EMRPVQMTPA HHTDRFAELV CTNSLRSNSI
TNAVGLLKEE MRRLDSVIMR AADAHAVPAG NALAVDRDGF SQRVTELVSQ HPNITVVREE
VTEIPKDGVT VVATGPLTSP ALSEDIRRLV GHGDLYFYDA AAPIVTKESI DMSKVFFQSR
YDQGDAAYIN CPMTEEEFEA FYDALVHAEC AELKDFEEER YFEGCMPIEA LAKRGKQTLL
FGPMKPVGLR DPRTGRRPFA VVQLRQDNAA ATLYNMVGFQ THLKWGEQKR VFRMIPGLEQ
AEFVRYGVMH RNTYINSPVA LLPTYQAKAR PTLFFAGQMT GVEGYVESAA SGLIAGINAA
RVAAGQDALV FPPTTSMGSL AHYITHASPQ GFQPMNATFG IFPPLDPPVK DKKARYERYA
ARALEDLQAF MRELERV
|
|---|
| |