Gene Aaci_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1372 
Symbol 
ID8424879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1426709 
End bp1427503 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content59% 
IMG OID645027488 
Productpolysaccharide deacetylase 
Protein accessionYP_003184788 
Protein GI258511354 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCGCC GAATGGGGTC AGCCCTGATC GGTTTGCTCG CTGCATCCTC GTTCGTAACC 
TATGGCACGC CTATCGTGCA CGCAACCCCG TCAGGGCAGG CGAAGGTCGT CTATCTGACC
TTCGATGACG GCCCAAGTCA ACGATATACG CCCAAACTCC TGGACATCCT GCGCAACCAA
CACATTTCCG CGACGTTTTT CGTGGTGGGA TATCGGTGCG AGCAGTTCCC AGATATCGTT
CGTCGAATTC AACGGGAAGG CCACGAGATT GGGAACCACG GTTTTTCCCA TCTTGACCCC
AAAAAGCACG CGCTGGAAGA GTTCATCCTC GATATCCGGA AGACCGACAC GGCCGTGGTG
AAGGCCTGCG GAACGAAGCC CCTGTACTAC AGGCCCCCGT ATGGCTCCAT CGACGCAAGC
GAGATCGACT GTGTGCACAA ACTCGGCCAC CCCATTGCGC TGTGGACCGT CGACTCGATG
GACTGGAAGG CCAAATCGGC GAATGCGATT GTCAGCCAAG TCGAACGCCA CGCGCAGCCC
GGCTCCATCA TCTTGTTTCA CGACGGGATC AGCTCGAGCC GATATACCAT CGAGGCGATG
CCACGCATCA TTCGCGACTT TCGCCGCGAT GGATACACAT TCAAGACGCT CCCCATCCGC
GATTCACTGC GGATAGAGGC GTTCGTGCCG AAAACCGACG ACGACGCCAT CCTTCCACGT
GATACCCACG ACGTCCAGCG CAAACACCGA CCATCGGTCG GCACGCGCTG CATAGGCCGT
CAGAGCCGCG ACTAA
 
Protein sequence
MSRRMGSALI GLLAASSFVT YGTPIVHATP SGQAKVVYLT FDDGPSQRYT PKLLDILRNQ 
HISATFFVVG YRCEQFPDIV RRIQREGHEI GNHGFSHLDP KKHALEEFIL DIRKTDTAVV
KACGTKPLYY RPPYGSIDAS EIDCVHKLGH PIALWTVDSM DWKAKSANAI VSQVERHAQP
GSIILFHDGI SSSRYTIEAM PRIIRDFRRD GYTFKTLPIR DSLRIEAFVP KTDDDAILPR
DTHDVQRKHR PSVGTRCIGR QSRD