| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1362 |
|---|
| Symbol | |
|---|
| ID | 8424869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1418861 |
|---|
| End bp | 1420138 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645027478 |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_003184778 |
|---|
| Protein GI | 258511344 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.185241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATC GTTTTCTTGG AACAGCGGAT ACGGTGTACC GCGCAGATCC CGCGCAGTCA
CGGCTCGTGG GCAGGCGCTT AGCCAAGGGA TGTGTGACGC TGTTGGTCGC CTTTCCGATG
GTCGACTACA CGCTTCGACA ATTCGTGCAT CCGCTTGGAT CGATTTGGGA CAAGGTCGTG
CTCGCCATCC TCGCGCTCGT CGCGCTGAAT CGCGTGATGC GCGGGCATCG TCCCCAAGTC
TTTGCCTGGT CCAAATATGC CGGGTGGTAT ATCACGTACC TGATCGCCCT GCTGTTCATG
GGACTCGGCA GCCCAGGCAC GTCGTTCGAC GGATTCAGGG CCGACATGTA CGACATGCTG
TTTGGCCTTG TGCTTCCGTT CGTCGTCGAA CCCGAAGACG CGCCGTACTT TCTGTACGTC
GCGACCGCGC TGGCCATGCT CATCGGCCTG GACGGCGTGC TTCAATATGT GCTCGCGGTG
CCCATCCCGC CCGGTTGGGT GGATGTCGGG GAACATGTGC GCACGAGGGT GTTCTCTGTC
CTCAAATCGC CGAACGAGCT AGGCGCCTAC ATGGAGATGA TGGCACCCCT CATCATCGGC
ATGGGCTTTG CAGAAAAGGA TCGGGTTCGA AAAATGATCT TCCTCGCAGG AGGCTTCTTC
TGCCTGGTCG CGCTTCTCCT TACATACACG CGGGGCGCCT GGCTGGGGCT TGGCGTCGGT
GTGGTCCTGG TGGCCCTCGC GTTTGAACGC CGTTTGCTTG CCGTGGTGGT CGTGTTGGGG
GTCATTGGCT TCTTCCTACC CCCCATTCAT CACCGCGTCA TGGACCTGTT TTCCCAGGTC
TATTACATCA AGTCGTCCCA GGGCGGGAGA TTGGTCCGAT GGCAGCAGGC GTTCGACCAG
CTCGCTGGAA GTCCGTTGTT CGGAGCCGGA CTCGGGCGTT ACGGCGGCGC GGTGGCTTCG
GACAAGGGAC TGTCCATCTA CTCGGACAAT TACTACGCCA AGGTGTTGGG GGAGTCGGGT
CTCGTCGGAC TCGTGCTCTT CTTTGCTCTG CATGTGCGCA TTGTGGTGGA AGTGGTGCAG
AAGGTGGTGC GCCGCGCCGT CGGCGCCCAT CGCCCCATTG CCTTGGGCGG ACTGATCGGC
GTGATCGCGC TCTTGGTGCA CAATGTGGTG GAAAACGTGT TTGAGTATCC GGCCAACTGC
CTGAATTACT TCCTCATGGT CGGGTTGCTG CTCTTGTGGA GCCGCACCTT CGATGGTCAG
GAGGAGAACC ATGGCTAA
|
|---|
| Protein sequence | MQNRFLGTAD TVYRADPAQS RLVGRRLAKG CVTLLVAFPM VDYTLRQFVH PLGSIWDKVV
LAILALVALN RVMRGHRPQV FAWSKYAGWY ITYLIALLFM GLGSPGTSFD GFRADMYDML
FGLVLPFVVE PEDAPYFLYV ATALAMLIGL DGVLQYVLAV PIPPGWVDVG EHVRTRVFSV
LKSPNELGAY MEMMAPLIIG MGFAEKDRVR KMIFLAGGFF CLVALLLTYT RGAWLGLGVG
VVLVALAFER RLLAVVVVLG VIGFFLPPIH HRVMDLFSQV YYIKSSQGGR LVRWQQAFDQ
LAGSPLFGAG LGRYGGAVAS DKGLSIYSDN YYAKVLGESG LVGLVLFFAL HVRIVVEVVQ
KVVRRAVGAH RPIALGGLIG VIALLVHNVV ENVFEYPANC LNYFLMVGLL LLWSRTFDGQ
EENHG
|
|---|
| |