Gene Aaci_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1348 
Symbol 
ID8424852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1399783 
End bp1403355 
Gene Length3573 bp 
Protein Length1190 aa 
Translation table11 
GC content67% 
IMG OID645027461 
Productchromosome segregation protein SMC 
Protein accessionYP_003184764 
Protein GI258511330 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type
[TIGR02169] chromosome segregation protein SMC, primarily archaeal type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.363656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTATCTCA AACAGATTGA CATCCTCGGG TTCAAGTCGT TTGCCGACAA GACCCAGATC 
GTCCTGTCTC CGGGCATCAC GGCCATCGTG GGCCCGAATG GGAGCGGCAA GAGCAACATC
GCCGACGCGC TCCGCTGGGT CTTGGGCGAG CAAAGCGTCC GAAATCTGCG CGGCAGCAAG
ATGGAGGACG TGATCTTCGC AGGCAGTGAA CTGCGCAAGG CCACCAATTT GTGCGAAGTG
TCGATCACGC TCGACAACAC GGACCATCAC CTACCCGTGA CGTTCGAAGA GGTGACCATC
ACCCGGCGCG CGTTCCGGTC GGGCGAGAGC GAATATTGGA TCAACCGCCA ACCTTGCCGC
CTCAAGGACA TCCACGAGCT ATTCATGGAC ACGGGGCTCG GCCGCGAGGC GTATTCCATC
ATCGGGCAGG GCAAGATCGA GGAAATGTTG TCCACGCGGC CGGAGGACCG TCGGGGGCCG
TTCGAGGACG CGGCCGGGAT CGTGAAGTTC AAGCATCGGC GCAAAGAGGC CGAGCGAAAG
CTGGAGGAGA CGGCCGCGAA TTTGGTGCGC GTCGACGACA TCCTCGCGGA ACTCGAAGCT
CAACTTGGCC CGCTTGCGGA GGCGCGGCGG ATCGCAGAGC GGTATCAGGC GCTGTCGGAC
GAAATCGAGG AGACGGAGAT CGCGCTGCTC GTCGTCGAGA TCGATCGGCT GCACGACCGG
TACGAGCAGT TGAAGCGCCA GGTGGCTCGC GAGGAAGCAG CGCGGAACGA GGCACAGGAG
CGCTTGCGCC TCAGCGAGGA GGCATGGAAG GCGCGACGGC AGGCGCTGAA CGAGGCCACG
GCGCGGCTCG AATCGCTGCA GCAGCAGTAC GTGGAGGTGG TCGAGGCCCG GCAAAAGGCA
GAAGGGTCGC TCGCACTTGC GGAGGAGCGA CTCGCAGCCC TCGCACAGCG CGCGGAAGAT
CGGCGCAGGC GCAGGGAGGA GTTGGCGCGC GATCTCGCCG AACTTGAGGC CGCCATGGAG
GCGGTCGCGC GGGCCGAGGC GGAGGCCGCC GCGGCGCTCG GGGAGAGACA ACACCTGCTG
GCGGACGCGC GCCAGCGGGC GGACGATGCG AGGCGGCTCG AACTGGCGGA CGAGATCGAC
CGCTTGAGTG GGGAACTCAT CGACGCCAAT CATCGTGCGG CTGCGCTTCG CAACGAGTGG
AAGACGCTCG AGGAGAAGTT TCAGGCGGGC GCACTGCGGC ACGAGCGATT TGAAGAAGAG
GCAGCGCGAA TTGAGGCCGA GCGAGACCGC GTCGAGGCGG GTAAGCAGGA GCGCGCGCAG
CGGGCGGAGG AGATCAGGCG CGAACTGGAC GAACTCGAGC GCCAATTGGC CGCATTGGAG
GCCGAGCGGG AACAGGCCGC GTCCGACGAG GCGCAGGCCG TTTCCGCGTG GCACCGCCTG
CAGGCGGATG TGCAGGGACT GTCGAGCCGC CTGGAGTTGT TGCGCGATCT CGAGGCGGGG
TACGACGGCT ACGCGCACGG CGTGCGCATG GTGCTTCAGC AAGCGAGGCG CGGGGCGCTC
AAGGGCGTGT GCGGCTCCGT CGCCGAGCTG ATTCGCGTGG ATCGAACGTA CGAGCTGGCC
GTGGAAACGG CCCTGGGCGG CGCGCTGCAG AACGTGGTCG TCGAGACGGA GCAAGACGCG
ATGGATGCGA TTCGCCTGTT GAAGGCCCGC CAAGGCGGCC GAGCGACATT CATCCCGCTT
GACGTCGTTC GATCGCGGCG AATGGAGGAC GGGCTCGTGT CGCGCGCGGC TGCAGAGCCC
GGTTTCCTTG GGCTCGCGAG CGATCTCGTC TCGTTCGACG AGCGCTTCCG CCACGCGGTC
GAACACTTGC TTGGCAACGT GGTCATCGCA CAGGATCTCG AGCGCGCGAG CCGCATCGCG
CGGACGCTGA ACCACCGCTT TCGCGTCGTC ACGCTGGAAG GCGACGTCAT CGCGCCGGGC
GGCCTGATGA CCGGCGGTCA CGTGAACCGC AAGGGGCCGG GGCTACTCGG CCGCCAACGC
GAACGCGAGG ATTTGGAGAA CAAGCTGAAG GCGCTCGAGG CCGAGCGAGC GCGTTTGAGC
GCTCGCCAGA AGGAGCTTCG GGCGCGCGTC GTCGAACTCG GGCGCGAACG GGATCGCCTC
GAGGCGGAGC GAGCGGTGCG CCTGGGTCAT CTGAAACAGT TCGAGAACGA GGAGCGGCAG
GCGGACTTTC AGCTCAAGAC CTTGGCCGAG CGCATGGAAG CCCTCGACTG GGAGCGCGAA
GCGCTGGCCG CGGACCGCTC GCAGATCGAA CGGCGCAAAG CAGAGGTCCG GGATTTGTTG
GCGGAAGCCG AGGACGAAGT GACGCAGCTC ACCGCCGCCA TCGCGGAGCG CCGAGATCGC
CTCGCAGCCC TGGAATCGGA GCTCGCGGAG GCGAAAGAGC GGCTCACGGG GCTTCGGATT
GAGGTGGCGA CGCTCGAGCA GGAGCGAGAG AATCTGGCGC AGCGGATGGC GGAGTTGCGC
GAGCGGAAGG CGCGGCTCGA GCGCGTCCAT GCGGAGATGG CCAAGGAGGA GGCCCGCGAT
GAGGCGGAGG CTGCGCGCCT TGCGGCAGCG CGCGAATCGG AGCGCGCCGA GGCCTTGCGC
CTGGCGGAGG AACTGGATAC GCTCGAACAA ACGCTGGCCG CGGCCCGTCA AGCGCGACAT
GAACTGGAGG CAGAAGCTCG CGAGCTCGAG GAGGACGTGC GGCGGAAGCG GCGTGCCGCC
GAGGAGCAGG AGGCCACTCT CCAGCGCGCC CTCGTCGCCG TGGAGCGCGC CGACGCCGAT
CTCTCCCATG CGCTCGCGAA GATGGGCGAA CAATTCGGCA TGACCTACGA GTGGGCCAAG
GAGCGGTATC CCCTTCAGGG CACCGTGGCG GAGACGGAAC GGCGGCTGGA GTCGCTGCGC
CGCGAGCGCG CTTCCCTCGG TGACGTGAAC CTCGGCGCCA TTGAGGAGCA CGAGCGACTG
TCGGAACGGG TCCGGTTCCT CACGGAGCAA CGGGACGATC TCGTCGCAGC CCGCCAGCAG
CTGGAGCAGC TGATCGACGA GATCGATCAA GAAATGGCAG AACGGTTCAT GGAGACGTTT
CAGCAGATCC GCGCGGAGTT TGGCAAGGCG TTTCACAGCC TGTTTCAAGG AGGCGAGGCG
GATCTGGTGC TGACCAATCC CGAGGATCCT CTGACGACGG GCATCGAAGT GGTGGCGAAG
CCGCCGGGCA AGAAGTTGCA GAACCTCAAC CTTCTCTCGG GCGGCGAGCG CGCGCTGACC
GCGATGGCCC TTCTGTTTGC CATCCTGCGC GTGCGGCCAG TCCCGTTCTG TGTCTTGGAC
GAGGTCGAGG CGGCGCTCGA CGAGGCGAAC GTGGCCCGCT TCGCCCACGA GCTTCGCTTG
CTTGCCGCCG ACACCCAGTT CATCGTGATC ACGCACAGGC GAGGTACGAT GGAGGAGGCG
GACGCGCTGT ACGGCGTGAC GATGCCCGAA CGCGGGGTGT CGTCGCTGGT GAGCGTGCGT
TTGAGCGACG AGATCGACTA CGAAACGGCG TAG
 
Protein sequence
MYLKQIDILG FKSFADKTQI VLSPGITAIV GPNGSGKSNI ADALRWVLGE QSVRNLRGSK 
MEDVIFAGSE LRKATNLCEV SITLDNTDHH LPVTFEEVTI TRRAFRSGES EYWINRQPCR
LKDIHELFMD TGLGREAYSI IGQGKIEEML STRPEDRRGP FEDAAGIVKF KHRRKEAERK
LEETAANLVR VDDILAELEA QLGPLAEARR IAERYQALSD EIEETEIALL VVEIDRLHDR
YEQLKRQVAR EEAARNEAQE RLRLSEEAWK ARRQALNEAT ARLESLQQQY VEVVEARQKA
EGSLALAEER LAALAQRAED RRRRREELAR DLAELEAAME AVARAEAEAA AALGERQHLL
ADARQRADDA RRLELADEID RLSGELIDAN HRAAALRNEW KTLEEKFQAG ALRHERFEEE
AARIEAERDR VEAGKQERAQ RAEEIRRELD ELERQLAALE AEREQAASDE AQAVSAWHRL
QADVQGLSSR LELLRDLEAG YDGYAHGVRM VLQQARRGAL KGVCGSVAEL IRVDRTYELA
VETALGGALQ NVVVETEQDA MDAIRLLKAR QGGRATFIPL DVVRSRRMED GLVSRAAAEP
GFLGLASDLV SFDERFRHAV EHLLGNVVIA QDLERASRIA RTLNHRFRVV TLEGDVIAPG
GLMTGGHVNR KGPGLLGRQR EREDLENKLK ALEAERARLS ARQKELRARV VELGRERDRL
EAERAVRLGH LKQFENEERQ ADFQLKTLAE RMEALDWERE ALAADRSQIE RRKAEVRDLL
AEAEDEVTQL TAAIAERRDR LAALESELAE AKERLTGLRI EVATLEQERE NLAQRMAELR
ERKARLERVH AEMAKEEARD EAEAARLAAA RESERAEALR LAEELDTLEQ TLAAARQARH
ELEAEARELE EDVRRKRRAA EEQEATLQRA LVAVERADAD LSHALAKMGE QFGMTYEWAK
ERYPLQGTVA ETERRLESLR RERASLGDVN LGAIEEHERL SERVRFLTEQ RDDLVAARQQ
LEQLIDEIDQ EMAERFMETF QQIRAEFGKA FHSLFQGGEA DLVLTNPEDP LTTGIEVVAK
PPGKKLQNLN LLSGGERALT AMALLFAILR VRPVPFCVLD EVEAALDEAN VARFAHELRL
LAADTQFIVI THRRGTMEEA DALYGVTMPE RGVSSLVSVR LSDEIDYETA