Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_1348 |
Symbol | |
ID | 8424852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 1399783 |
End bp | 1403355 |
Gene Length | 3573 bp |
Protein Length | 1190 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 645027461 |
Product | chromosome segregation protein SMC |
Protein accession | YP_003184764 |
Protein GI | 258511330 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.363656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATCTCA AACAGATTGA CATCCTCGGG TTCAAGTCGT TTGCCGACAA GACCCAGATC GTCCTGTCTC CGGGCATCAC GGCCATCGTG GGCCCGAATG GGAGCGGCAA GAGCAACATC GCCGACGCGC TCCGCTGGGT CTTGGGCGAG CAAAGCGTCC GAAATCTGCG CGGCAGCAAG ATGGAGGACG TGATCTTCGC AGGCAGTGAA CTGCGCAAGG CCACCAATTT GTGCGAAGTG TCGATCACGC TCGACAACAC GGACCATCAC CTACCCGTGA CGTTCGAAGA GGTGACCATC ACCCGGCGCG CGTTCCGGTC GGGCGAGAGC GAATATTGGA TCAACCGCCA ACCTTGCCGC CTCAAGGACA TCCACGAGCT ATTCATGGAC ACGGGGCTCG GCCGCGAGGC GTATTCCATC ATCGGGCAGG GCAAGATCGA GGAAATGTTG TCCACGCGGC CGGAGGACCG TCGGGGGCCG TTCGAGGACG CGGCCGGGAT CGTGAAGTTC AAGCATCGGC GCAAAGAGGC CGAGCGAAAG CTGGAGGAGA CGGCCGCGAA TTTGGTGCGC GTCGACGACA TCCTCGCGGA ACTCGAAGCT CAACTTGGCC CGCTTGCGGA GGCGCGGCGG ATCGCAGAGC GGTATCAGGC GCTGTCGGAC GAAATCGAGG AGACGGAGAT CGCGCTGCTC GTCGTCGAGA TCGATCGGCT GCACGACCGG TACGAGCAGT TGAAGCGCCA GGTGGCTCGC GAGGAAGCAG CGCGGAACGA GGCACAGGAG CGCTTGCGCC TCAGCGAGGA GGCATGGAAG GCGCGACGGC AGGCGCTGAA CGAGGCCACG GCGCGGCTCG AATCGCTGCA GCAGCAGTAC GTGGAGGTGG TCGAGGCCCG GCAAAAGGCA GAAGGGTCGC TCGCACTTGC GGAGGAGCGA CTCGCAGCCC TCGCACAGCG CGCGGAAGAT CGGCGCAGGC GCAGGGAGGA GTTGGCGCGC GATCTCGCCG AACTTGAGGC CGCCATGGAG GCGGTCGCGC GGGCCGAGGC GGAGGCCGCC GCGGCGCTCG GGGAGAGACA ACACCTGCTG GCGGACGCGC GCCAGCGGGC GGACGATGCG AGGCGGCTCG AACTGGCGGA CGAGATCGAC CGCTTGAGTG GGGAACTCAT CGACGCCAAT CATCGTGCGG CTGCGCTTCG CAACGAGTGG AAGACGCTCG AGGAGAAGTT TCAGGCGGGC GCACTGCGGC ACGAGCGATT TGAAGAAGAG GCAGCGCGAA TTGAGGCCGA GCGAGACCGC GTCGAGGCGG GTAAGCAGGA GCGCGCGCAG CGGGCGGAGG AGATCAGGCG CGAACTGGAC GAACTCGAGC GCCAATTGGC CGCATTGGAG GCCGAGCGGG AACAGGCCGC GTCCGACGAG GCGCAGGCCG TTTCCGCGTG GCACCGCCTG CAGGCGGATG TGCAGGGACT GTCGAGCCGC CTGGAGTTGT TGCGCGATCT CGAGGCGGGG TACGACGGCT ACGCGCACGG CGTGCGCATG GTGCTTCAGC AAGCGAGGCG CGGGGCGCTC AAGGGCGTGT GCGGCTCCGT CGCCGAGCTG ATTCGCGTGG ATCGAACGTA CGAGCTGGCC GTGGAAACGG CCCTGGGCGG CGCGCTGCAG AACGTGGTCG TCGAGACGGA GCAAGACGCG ATGGATGCGA TTCGCCTGTT GAAGGCCCGC CAAGGCGGCC GAGCGACATT CATCCCGCTT GACGTCGTTC GATCGCGGCG AATGGAGGAC GGGCTCGTGT CGCGCGCGGC TGCAGAGCCC GGTTTCCTTG GGCTCGCGAG CGATCTCGTC TCGTTCGACG AGCGCTTCCG CCACGCGGTC GAACACTTGC TTGGCAACGT GGTCATCGCA CAGGATCTCG AGCGCGCGAG CCGCATCGCG CGGACGCTGA ACCACCGCTT TCGCGTCGTC ACGCTGGAAG GCGACGTCAT CGCGCCGGGC GGCCTGATGA CCGGCGGTCA CGTGAACCGC AAGGGGCCGG GGCTACTCGG CCGCCAACGC GAACGCGAGG ATTTGGAGAA CAAGCTGAAG GCGCTCGAGG CCGAGCGAGC GCGTTTGAGC GCTCGCCAGA AGGAGCTTCG GGCGCGCGTC GTCGAACTCG GGCGCGAACG GGATCGCCTC GAGGCGGAGC GAGCGGTGCG CCTGGGTCAT CTGAAACAGT TCGAGAACGA GGAGCGGCAG GCGGACTTTC AGCTCAAGAC CTTGGCCGAG CGCATGGAAG CCCTCGACTG GGAGCGCGAA GCGCTGGCCG CGGACCGCTC GCAGATCGAA CGGCGCAAAG CAGAGGTCCG GGATTTGTTG GCGGAAGCCG AGGACGAAGT GACGCAGCTC ACCGCCGCCA TCGCGGAGCG CCGAGATCGC CTCGCAGCCC TGGAATCGGA GCTCGCGGAG GCGAAAGAGC GGCTCACGGG GCTTCGGATT GAGGTGGCGA CGCTCGAGCA GGAGCGAGAG AATCTGGCGC AGCGGATGGC GGAGTTGCGC GAGCGGAAGG CGCGGCTCGA GCGCGTCCAT GCGGAGATGG CCAAGGAGGA GGCCCGCGAT GAGGCGGAGG CTGCGCGCCT TGCGGCAGCG CGCGAATCGG AGCGCGCCGA GGCCTTGCGC CTGGCGGAGG AACTGGATAC GCTCGAACAA ACGCTGGCCG CGGCCCGTCA AGCGCGACAT GAACTGGAGG CAGAAGCTCG CGAGCTCGAG GAGGACGTGC GGCGGAAGCG GCGTGCCGCC GAGGAGCAGG AGGCCACTCT CCAGCGCGCC CTCGTCGCCG TGGAGCGCGC CGACGCCGAT CTCTCCCATG CGCTCGCGAA GATGGGCGAA CAATTCGGCA TGACCTACGA GTGGGCCAAG GAGCGGTATC CCCTTCAGGG CACCGTGGCG GAGACGGAAC GGCGGCTGGA GTCGCTGCGC CGCGAGCGCG CTTCCCTCGG TGACGTGAAC CTCGGCGCCA TTGAGGAGCA CGAGCGACTG TCGGAACGGG TCCGGTTCCT CACGGAGCAA CGGGACGATC TCGTCGCAGC CCGCCAGCAG CTGGAGCAGC TGATCGACGA GATCGATCAA GAAATGGCAG AACGGTTCAT GGAGACGTTT CAGCAGATCC GCGCGGAGTT TGGCAAGGCG TTTCACAGCC TGTTTCAAGG AGGCGAGGCG GATCTGGTGC TGACCAATCC CGAGGATCCT CTGACGACGG GCATCGAAGT GGTGGCGAAG CCGCCGGGCA AGAAGTTGCA GAACCTCAAC CTTCTCTCGG GCGGCGAGCG CGCGCTGACC GCGATGGCCC TTCTGTTTGC CATCCTGCGC GTGCGGCCAG TCCCGTTCTG TGTCTTGGAC GAGGTCGAGG CGGCGCTCGA CGAGGCGAAC GTGGCCCGCT TCGCCCACGA GCTTCGCTTG CTTGCCGCCG ACACCCAGTT CATCGTGATC ACGCACAGGC GAGGTACGAT GGAGGAGGCG GACGCGCTGT ACGGCGTGAC GATGCCCGAA CGCGGGGTGT CGTCGCTGGT GAGCGTGCGT TTGAGCGACG AGATCGACTA CGAAACGGCG TAG
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Protein sequence | MYLKQIDILG FKSFADKTQI VLSPGITAIV GPNGSGKSNI ADALRWVLGE QSVRNLRGSK MEDVIFAGSE LRKATNLCEV SITLDNTDHH LPVTFEEVTI TRRAFRSGES EYWINRQPCR LKDIHELFMD TGLGREAYSI IGQGKIEEML STRPEDRRGP FEDAAGIVKF KHRRKEAERK LEETAANLVR VDDILAELEA QLGPLAEARR IAERYQALSD EIEETEIALL VVEIDRLHDR YEQLKRQVAR EEAARNEAQE RLRLSEEAWK ARRQALNEAT ARLESLQQQY VEVVEARQKA EGSLALAEER LAALAQRAED RRRRREELAR DLAELEAAME AVARAEAEAA AALGERQHLL ADARQRADDA RRLELADEID RLSGELIDAN HRAAALRNEW KTLEEKFQAG ALRHERFEEE AARIEAERDR VEAGKQERAQ RAEEIRRELD ELERQLAALE AEREQAASDE AQAVSAWHRL QADVQGLSSR LELLRDLEAG YDGYAHGVRM VLQQARRGAL KGVCGSVAEL IRVDRTYELA VETALGGALQ NVVVETEQDA MDAIRLLKAR QGGRATFIPL DVVRSRRMED GLVSRAAAEP GFLGLASDLV SFDERFRHAV EHLLGNVVIA QDLERASRIA RTLNHRFRVV TLEGDVIAPG GLMTGGHVNR KGPGLLGRQR EREDLENKLK ALEAERARLS ARQKELRARV VELGRERDRL EAERAVRLGH LKQFENEERQ ADFQLKTLAE RMEALDWERE ALAADRSQIE RRKAEVRDLL AEAEDEVTQL TAAIAERRDR LAALESELAE AKERLTGLRI EVATLEQERE NLAQRMAELR ERKARLERVH AEMAKEEARD EAEAARLAAA RESERAEALR LAEELDTLEQ TLAAARQARH ELEAEARELE EDVRRKRRAA EEQEATLQRA LVAVERADAD LSHALAKMGE QFGMTYEWAK ERYPLQGTVA ETERRLESLR RERASLGDVN LGAIEEHERL SERVRFLTEQ RDDLVAARQQ LEQLIDEIDQ EMAERFMETF QQIRAEFGKA FHSLFQGGEA DLVLTNPEDP LTTGIEVVAK PPGKKLQNLN LLSGGERALT AMALLFAILR VRPVPFCVLD EVEAALDEAN VARFAHELRL LAADTQFIVI THRRGTMEEA DALYGVTMPE RGVSSLVSVR LSDEIDYETA
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