Gene Aaci_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1330 
Symbol 
ID8424834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1383843 
End bp1385879 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content65% 
IMG OID645027443 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_003184746 
Protein GI258511312 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCGCTCA GATCGCTGTC CGTGCGCGCG CTGCCGGGCG TGGGTCCGCA GAAGGAGCGA 
GCACTCGAAG CGCTCGGCAT TCGAACGGTC GACGACTTGC TGCACACGTA TCCGTTTCGA
TATGACGAGC GAGCGGAGAA GCCATTTTCC GAATGGCGCG ATGGCGATCG CGTCACGGCG
CGGGCTGTCG TCGAAGGACC TGTGCAAGTC AGGTGGCGCG GTTCCAAGTC CATCATGACG
GCGCGCGTGC GCGTGGACGG CCAACATCCG GTCGTCTGCC TCTGGTTTTC GCAACATTAC
CTTCGCTCCA AGCTATCCGA CGGGCGGTTC ATCGTGGTAA CAGGCAAATG GAATGAAGCT
CTGCGCCGCC TGGTCGCCAG CGAGACATCG TTTGACGCCG GGACACAGGC GCCCTCGTTG
GTACCGGTAT ACCGCGCGAG CAAAGAACTC TCGACGAAGG CCATCCACCA ACTCATCCTG
AAGGCGTTGG AGCAATACGC GGAAGAGATC CAGGAGTCGC TGCCGTACGC GCTCGTGCGC
AAGTATCGGC TTTGGACGCA TCGAGATGCG CTCTTCGGGA TGCATCGGCC CAAATCGCTC
GAGGACGTCC GTCAGGCCCG GCGGCGGCTG GTGTTCGAGG AGTTTCTCTT GTTTCAAATT
CAGCTCCAGT GGCTTCGCGC AAAGCGCGAG GAGCCCGCGG GGCGCGCGCA GCCCGTGCCG
AGTGATGCGC TGACGGCGTT CGAGGCCCTC CTGCCCGGTC CGATGACGAA CGCGCAGCGG
CGCGCGTGCG AGGACATCCT GCGGGATCTT CAGCGCCCCG TGCCCATGAC GCGCCTGATT
CAGGGGGACG TCGGATCGGG CAAGACGTGG GTGGCCCTTT TTGCGTGCTT TGCGGTCCAC
CTCGCGCGCG GACAGTCCGC GCTCATGGCG CCCACCGAAA TCCTCGCCGA GCAGCACGCG
AGGCTCGCGC ACGAGCTGCT CGGCTCTGCC GGCGTTCGCG TCGAGCTTTT GACGGGTTCG
GTGACAGGAC GCGAGCGCGA TCGCGTGCTG GCGGGCCTCG CCTCCGGGGA CGTGTCGCTT
GCCGTCGGCA CGCACGCGCT TCTGTCCGAG GGTGTCGAGT TTCGCGATCT CGCCCTGCTC
GTCACCGATG AGCAGCATCG CTTCGGCGTC GCGCAGCGCG CGAGGCTGCG TGAGAAGGGC
CGCGCCCCGG ACGTGCTCAT GCTGTCGGCG ACGCCGATTC CGCGGACGCT TGCGCTCGCC
ATCTACGGCG ACATGGACGT GTCCATCCTG AACGAGTTGC CGAAGGGCCG AAAGCCCGTT
CAGACCATCG CCGTGCCGTC GAAAGACGAC GAGACCGTTC TTCGCCTCAT CCGCAGAGAG
TTGGCGCGGG GACACCAGGC CTACATCGTC GCGCCGGCCA TCGAGGCGTC GGAGCGAGAC
GACGTGGCGT CCGTGACGGA GCTTTATGAG CGCGTGCGCG AACACCTGGC GGGATTTCGC
GTCGAACTCC TGCACGGGCG GATGCCAAGC GCCGACAAGG AGCGCATGAT GCGCGCGTTC
CGCGACGGCG ACATCCACGC GCTCGTCGCG ACGACCGTGA TCGAGGTCGG CATCGACGTG
CCCAATGCCA CCGTGATGGC CATCTATGGC GCGGAGCGGT TCGGTTTGGC GCAATTGCAT
CAGCTTCGCG GGCGAGTCGG ACGAGGGCCG CATCCGAGCT ACTGCCTGCT CATTCACGAC
GCATCGTCCG AGGCGGCGCG CGCGCGAATC GAGACCATGC TGCAGACGAA CGACGGGTTT
GAGATCGCGG AGCGGGACCT GGAATTGCGC GGGCCTGGGG AGTTGTTCGG CCTGAGGCAG
AGCGGTCTTC CCGAGTTCGC GTTGGGCGAT CTCGCCCGCG ATTATCGGAT CATGGAGGTC
GCAAGGGAAG AGGCGCTGGC GCTCCTTCGG CGGGACGATT TTTGGTACGC TCCGTGGGCC
GAGGGTCTGC GCAACGCGCT GAAGGAGGCC ATGGACAAGG TTTCGTATCG AGACTGA
 
Protein sequence
MSLRSLSVRA LPGVGPQKER ALEALGIRTV DDLLHTYPFR YDERAEKPFS EWRDGDRVTA 
RAVVEGPVQV RWRGSKSIMT ARVRVDGQHP VVCLWFSQHY LRSKLSDGRF IVVTGKWNEA
LRRLVASETS FDAGTQAPSL VPVYRASKEL STKAIHQLIL KALEQYAEEI QESLPYALVR
KYRLWTHRDA LFGMHRPKSL EDVRQARRRL VFEEFLLFQI QLQWLRAKRE EPAGRAQPVP
SDALTAFEAL LPGPMTNAQR RACEDILRDL QRPVPMTRLI QGDVGSGKTW VALFACFAVH
LARGQSALMA PTEILAEQHA RLAHELLGSA GVRVELLTGS VTGRERDRVL AGLASGDVSL
AVGTHALLSE GVEFRDLALL VTDEQHRFGV AQRARLREKG RAPDVLMLSA TPIPRTLALA
IYGDMDVSIL NELPKGRKPV QTIAVPSKDD ETVLRLIRRE LARGHQAYIV APAIEASERD
DVASVTELYE RVREHLAGFR VELLHGRMPS ADKERMMRAF RDGDIHALVA TTVIEVGIDV
PNATVMAIYG AERFGLAQLH QLRGRVGRGP HPSYCLLIHD ASSEAARARI ETMLQTNDGF
EIAERDLELR GPGELFGLRQ SGLPEFALGD LARDYRIMEV AREEALALLR RDDFWYAPWA
EGLRNALKEA MDKVSYRD