| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1319 |
|---|
| Symbol | |
|---|
| ID | 8424823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1372532 |
|---|
| End bp | 1374949 |
|---|
| Gene Length | 2418 bp |
|---|
| Protein Length | 805 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645027433 |
|---|
| Product | primosomal protein N' |
|---|
| Protein accession | YP_003184736 |
|---|
| Protein GI | 258511302 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.342383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAG GGACCGCGCG CGTCGCGGAG GTCGTGGTCG ACGGGACGGC GCTGTTTTTG
GACAAGCGGT TCGATTACAT CGTTCCGCCG GGGATGGATG TATCGCCCGG CGTGCGCGTG
GTGGTGCCGA TGCGAGACTC GGTGCGATCC GGCATCGTCT GGGCGGTGCG GGAGGTCGCC
AACGTCGGCG GGCTTCGTCC GCTCGCGCGC GTGATCGACC GAGTTCCCGT GCTGACGCCT
CATCAGATGC GCATGGCGGA GTGGCTCTGC GACCGATATG CCGCCACGCT TCCGGAGGCC
GTGTCGGCCA TCCTGCCGGG GGCGTTTCGC GTGCGCGTGC GCAAAGTGAT CGTGCCGAGC
GCGGATGCGC CCGTCCCGGA CGACGTGAAA GCCTCGACAC TCTTTCGCTT CATCGCCGAG
TCCGAGCCCG AGTGGAGCGA GATTCGGGCG CGATCGAAGG CGGACGAGCG CGCCGCCAGG
GCGTGGGCCG AAGCCGGATT CGTTCGCGAA GAGCTCCGGG TGGATGAGGC GGTGGGCGAG
AAGCGGCGGG CCTACCTCGT CACCCGCGCG TCGGAGGTGG ATCTCAGGCG CGAGGCGGAA
CGGCGGAGTC GGCGCGCGCG GCGCCAGAGC GAGCTGCTGC TGCACCTCGC CGAAGCGGGC
GAGATGCCGT GGGACAGGCG GGCGTATCCG CTCTCTTCCG TGGCGCCGCT CATCGAGGCG
GGACTGGTGG CTGTCGCGGA GCGGCGCGTG AAGCGGGCCC CTGCCTCGCT CGACGCGGAG
GAGCCCTGGC CAGAGCTCAC GCCGTATCAG GTGGCGGCGG TGCGAGCGCT GGCCGAGATG
GCCCGACAGG GGCATGGCGT GGCCCTGCTG CACGGCGTGA CGGGCAGCGG CAAGACCGAG
GTGTACATGC ACCTGATTCG CGGGGCCATC GAAGACGAGG GTCAGGCACT CGTTCTGGTG
CCCGAGATCG CGCTCACGCC GCAGCTCGTG CAGAGGTTCG AGCGAAGGTT CGGAGGCCGG
GTTGCCGTCC TGCACTCGGG ATTGTCGCTC GGCGAGCGGC GTGAGGAGTG GACGCGGGTC
CTCGAAGGAG AGGCGAGCGT GGTGATTGGG GCGAGATCGG CGGTCTTCGC GCCGATGCGC
AAGCTTCGAC TGGTCGTCAT CGACGAAGAA CACGAGCCTT CCTACAAGCA GGAGGACGCG
CCGCACTACG ACGCGCGCGA AGTGGCGATG TGGCGCGCAA GGGAGGCGGG TGCGCTCGTG
GTTCTCGGCT CTGCGACGCC CTCGCTCGCG TCGATGTTTC GGGTGGAGCG AGGCGACGCG
AGGCTCGTCT CCCTGCCGGT TCGGGCGAAC CGGCGGCCTC TTCCGCCGGT GGACGTGATC
GATATGCGCG AGGAGCTGCG CGCGGGAAAC CGGTCGATTT TCAGCCGCAG GCTCGCGGCG
GAGCTGGAGC GCACGGTGTC GGAGGGGATG CAGGCTATCC TGTTTCTTAA TCGACGCGGC
TACGCGCACG CGGCGCTGTG CCGGGCTTGC GGGCACAGCA TGGAGTGTCC CCGCTGTGAC
ATTCACCTCA CGGTCCACCG GCGGGCGGAC GGGCACGTCC TTGTGTGCCA CTACTGTGGG
CACGAGGAGC CGCTCGTGCG GCGCTGTCCT GCTTGCGCCG AGGATGCGCT GGTCCCGTAT
GGACTCGGAA CCGAGCAGGT GGAGCAGCAC CTGCTGCGCA CGTGGCCCGC GATGCGAGTC
CTCCGTATGG ACTTGGACAC CACGCGGCGG AAGGGGGCGC TCGAGTCTAT CATCGATCGG
TTCCAGCGGG GCGAAGCGGA CGTGCTCGTG GGCACGCAGA TGATCGCGAA GGGGCTCGAC
TTTCCGCGGG TGCGGCTGGT GGGCGTCGTG GCGGCGGATG CGATGCTCAC GCTTCCGGAC
TACCGAGCGA ACGAGCGCGC GTTTCAGCTT CTCACGCAGG TGGCCGGGCG GGCCGGGCGA
GCCGAAACCG ACGGTATCAC GCTTATTCAG ACGTATCAGC CCGGGCACCG CGCCATCGAA
GCGGCGAAAT CGCACGATTA TCGGCAGTTC TACGAGCGAG AGCGGGAAAG CCGCGAATTC
TTTCGCTATC CGCCCTTCTG CGAACTGGCG GTCTTTCTCG CCTCGCATTC GGAGGAGCGG
CTGGCGCGCG GCGCCGCGGC GAGGTTCGAG CGAGAACTCG CGCGTTCGCC GTCCGCCGCG
TCCTTGACCG TGTTGCCTGC CGGGCCAAGC GGCATTCGGC GGATCGACAA CGTGTATCGC
TATCAGGTTG TGATGAAGTA CGCGGCGTGG CAGGATGTGA AAGAGGACGT CGTGCGCGCG
TACCGATTGG TGAAGGAGAA GATGAACCGG CTGGGTGGAT CCGCCGTCCT CGACGTCAAC
GCCCAGCGGA TCGGTTGA
|
|---|
| Protein sequence | MTAGTARVAE VVVDGTALFL DKRFDYIVPP GMDVSPGVRV VVPMRDSVRS GIVWAVREVA
NVGGLRPLAR VIDRVPVLTP HQMRMAEWLC DRYAATLPEA VSAILPGAFR VRVRKVIVPS
ADAPVPDDVK ASTLFRFIAE SEPEWSEIRA RSKADERAAR AWAEAGFVRE ELRVDEAVGE
KRRAYLVTRA SEVDLRREAE RRSRRARRQS ELLLHLAEAG EMPWDRRAYP LSSVAPLIEA
GLVAVAERRV KRAPASLDAE EPWPELTPYQ VAAVRALAEM ARQGHGVALL HGVTGSGKTE
VYMHLIRGAI EDEGQALVLV PEIALTPQLV QRFERRFGGR VAVLHSGLSL GERREEWTRV
LEGEASVVIG ARSAVFAPMR KLRLVVIDEE HEPSYKQEDA PHYDAREVAM WRAREAGALV
VLGSATPSLA SMFRVERGDA RLVSLPVRAN RRPLPPVDVI DMREELRAGN RSIFSRRLAA
ELERTVSEGM QAILFLNRRG YAHAALCRAC GHSMECPRCD IHLTVHRRAD GHVLVCHYCG
HEEPLVRRCP ACAEDALVPY GLGTEQVEQH LLRTWPAMRV LRMDLDTTRR KGALESIIDR
FQRGEADVLV GTQMIAKGLD FPRVRLVGVV AADAMLTLPD YRANERAFQL LTQVAGRAGR
AETDGITLIQ TYQPGHRAIE AAKSHDYRQF YERERESREF FRYPPFCELA VFLASHSEER
LARGAAARFE RELARSPSAA SLTVLPAGPS GIRRIDNVYR YQVVMKYAAW QDVKEDVVRA
YRLVKEKMNR LGGSAVLDVN AQRIG
|
|---|
| |