Gene Aaci_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1300 
Symbol 
ID8424804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1349586 
End bp1350227 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID645027414 
Producttranscriptional regulator, TraR/DksA family 
Protein accessionYP_003184717 
Protein GI258511283 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02890] sporulation protein, yteA family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACGG ATTCGATTCG ATCCCGCCTG GAGGCGGCGC GGGAGCGCCT GATCGATCGC 
CTGAACGGAG CCGAAACGTC TGCGGACATC CGCAGCGCCA TGCCCGACGA ATTCTCGGAA 
CTCGCCATGT ATGACAATCA TCCCGCGGAC GTCGCCAGTG AACTCGCGCT CCGCAATCAG 
GCGGTTGGCG AACGGCTGCG CGACGAGCGC GCGCTTGCCG ACGTGGAGGA TGCGCTCTCG 
CGGATCCGCC AGGGAACCTA TGGCCAATGC GAGTCCTGCG GGCGGCCCAT TCCGCCGGAT 
CGGCTAGAGG CAATTCCGAC GACTCGTCGA TGCGTGGACT GTGAGCGGGA GGTGGAGGCC 
AGGCAGGCGT CAGCACGTCG CCCCGTGGAG GAGGACGTGC TGGCGCCCGC GTTTGGCCAG 
TTCGATCGCG ACGGCGCGGA CGAGACGGGA TACGACGGGG AGGACGCGCT TCAGGACGTC 
ATGCGTTACG ACCGCCCCGT TACCGGTCTC GCGCGTTACG ACGAACCCGA CCTCGACGAC 
GACGCCGGGT ACGTCGAGTC GGTGGACCGT ATCTCGGAGG ACGACTATCG GCGGACGTTG 
CCGTCGCCGG CCCAGCTTCT CACCGATTAC GACGAGCCGT GA
 
Protein sequence
MDTDSIRSRL EAARERLIDR LNGAETSADI RSAMPDEFSE LAMYDNHPAD VASELALRNQ 
AVGERLRDER ALADVEDALS RIRQGTYGQC ESCGRPIPPD RLEAIPTTRR CVDCEREVEA 
RQASARRPVE EDVLAPAFGQ FDRDGADETG YDGEDALQDV MRYDRPVTGL ARYDEPDLDD 
DAGYVESVDR ISEDDYRRTL PSPAQLLTDY DEP