Gene Aaci_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1294 
Symbol 
ID8424798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1346477 
End bp1347166 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID645027408 
Productalanine racemase domain protein 
Protein accessionYP_003184711 
Protein GI258511277 
COG category[R] General function prediction only 
COG ID[COG0325] Predicted enzyme with a TIM-barrel fold 
TIGRFAM ID[TIGR00044] pyridoxal phosphate enzyme, YggS family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTACG GATTTGTGCG CCAGCGGGTC GAGGAAGTTC GAGCGCGGGT CGAAGCTGCC 
TGCCGTCGTT CCGGCCGCGA CCCGGCGGGC GTCCGCATTG TGGCTGTGAC GAAGACGGCG
TCTCCCGACG TGTTGCCCGC GCTTCACGCC GCGGGCATCC GGGATGCGGC CGAGAATCGC
TGGCAGATGG CGCGGGACAA GCTCGCGCAT CCTGCTGCTT CTAGCTTGGA TTGGCATTTC
ATCGGCACGC TTCAGACCAA CAAGGTCAAA TATGTCGTTC CGCGCTTTGC GTGGGTTCAC
TCGCTGGATC GGCCCGAACT GGCCCACGCG CTGTCCGAAG AGGCGGTGCG GCGGGGCGTC
GTGGTGAACG TGTTGGTCCA GGTCAACATC AGCGGCGAGG CGCAAAAGCA CGGCGTCGCG
CCCGAGGATG CGGAGGCTCT CGTCCGCCTC GCCCACGAGC TTCCAGGGCT TGCGGTCCGG
GGGCTCATGA CCATGGCGCC CATCGCCGAG CGCCCCGAGG ATGTGCGCCA CGTCTTCGCG
GGTCTTCGCG CGCTGATGCA CGAGCTGAGA TCCCGTCTGT CGCTCGAGGC GCTGGATCAG
CTTTCGATGG GAATGTCCGA CGACTTCGAG GTGGCTGTCG AGGAAGGCGC CACCATGATC
CGCATCGGAC GAAGGCTGGT CAATCCATGA
 
Protein sequence
MDYGFVRQRV EEVRARVEAA CRRSGRDPAG VRIVAVTKTA SPDVLPALHA AGIRDAAENR 
WQMARDKLAH PAASSLDWHF IGTLQTNKVK YVVPRFAWVH SLDRPELAHA LSEEAVRRGV
VVNVLVQVNI SGEAQKHGVA PEDAEALVRL AHELPGLAVR GLMTMAPIAE RPEDVRHVFA
GLRALMHELR SRLSLEALDQ LSMGMSDDFE VAVEEGATMI RIGRRLVNP