Gene Aaci_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1291 
Symbol 
ID8424795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1344507 
End bp1345286 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content58% 
IMG OID645027405 
ProductRNA polymerase, sigma 28 subunit, SigG 
Protein accessionYP_003184708 
Protein GI258511274 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02850] RNA polymerase sigma-G factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGCGCA ACAAGGTGGA GATCTGCGGC GTCAACACTT CTCAGCTTCC GGTTCTCACC 
AACGCTCAAA TGCGCGAGCT GTTCGAACAG CTTCGGGCCG GAGACCCCTC GGCGCGCGAG
AAGCTGGTCA ACGGCAACCT GCGCTTGGTC TTATCGGTCA TTCAGCGGTT TAACAATCGG
GGCGAGTACG TGGACGACCT GTTCCAAGTC GGATGCATCG GACTGATGAA AGCCATAGAC
AATTTTGACC TCAATCAAAA CGTGCGCTTT TCCACCTACG CGGTCCCCAT GATCGTCGGC
GAAATTCGCA GGTATCTGCG GGACAACAAC CCCATCCGCG TCAGCCGTTC CCTTCGCGAC
ATCGCCTACA AAGCGCTGCA GGTTCGCGAC ATGCTGGCGT CCAAAAACCT GCGCGAGCCT
TCCATCGTCG AGATCGCCAA CGAGATGAAC CTGCCGAAGG AGGAGGTCGT GTTCGCGCTC
GACGCCATTC AGGACCCCGT CTCCATGTTC GAGCCCATCT ACCACGACGG GGGAGATCCC
ATCTACGTGA TGGATCAGAT CCACGACGAG CGAGAAAAGG ATTCGGCGTG GGTGGAGGGC
ATTGCGCTGC GGGAGGCGAT GCGGAAGCTG TCGGACCGAG AGAAGAAGAT TCTGGCGAAG
CGGTTTTACG AGGGCAAGAC CCAGATGGAG GTGGCGGACG AGATTGGCAT CTCGCAGGCG
CAGGTCTCCC GCCTCGAGAA GGCAGCCATT CACCGCATGT ACAAGCACAT CCAGTCGTAA
 
Protein sequence
MKRNKVEICG VNTSQLPVLT NAQMRELFEQ LRAGDPSARE KLVNGNLRLV LSVIQRFNNR 
GEYVDDLFQV GCIGLMKAID NFDLNQNVRF STYAVPMIVG EIRRYLRDNN PIRVSRSLRD
IAYKALQVRD MLASKNLREP SIVEIANEMN LPKEEVVFAL DAIQDPVSMF EPIYHDGGDP
IYVMDQIHDE REKDSAWVEG IALREAMRKL SDREKKILAK RFYEGKTQME VADEIGISQA
QVSRLEKAAI HRMYKHIQS