Gene Aaci_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1289 
Symbol 
ID8424793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1342681 
End bp1343700 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content67% 
IMG OID645027403 
Productpeptidase U4 sporulation factor SpoIIGA 
Protein accessionYP_003184706 
Protein GI258511272 
COG category 
COG ID 
TIGRFAM ID[TIGR02854] sigma-E processing peptidase SpoIIGA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGCCC TGCCGGTGGT CTACATCGAC ATCGTCTGGA TGGTCAACTT CATCATGGAC 
TTCGCGTTGC TCTGGACGAC CGGCTGGCTG ATGAAGCGCC GGGCGCGCTG GACGCGGCTT
TTGGCGGGCG CCTTGGTAGG CGCGACGTAC GCGCTCGCGC TGTTTGTCCC TGCTCTGTCC
CTTGCCACCA CATGGCCCGG CAAGGCGCTT GTGTCCGTGC TGATGGTGTG GGTCTCCCTG
CCCCACCGAA GCGCGCTCGA TCTCGCCCGC CTCGTCGGCG TCTACTACCT CGTGTCGTTC
GTCGTGGCCG GGGCGAGCGT GGCCGCTCGG TTCGCCTTGC CCGGCACGAC GCTCAACCAC
GCCCTGTGGA GCGACCGCGG CGTGGCCTTT GCGACTTCAG GCGAGACGCT CGGCCTGATG
ATCGGCCTGC CGCTCGCCGT GGATGGGCTC AAGCGCCTCG CCGCGCGCCT GCGAAAGGAC
GCGCGCGTCG AGACATCTTT GGTCGATCTC GAAGTGCAAT TCGACGAGAT CGTCATCCGC
TGTCGCGCCC TGGTGGACAC GGGCAACGCA TTGGTCGATC CCGTGTCGAA GCGCCCCGTG
TCGCTGGTCG ACGCCGATGT CCTCATGCCC GCGTTTCCGG AGCCGGTCCG CGAGAAGCTG
GCCGTCGGCG CGGATCTGCT GGATGCCCTG ACCGAGGCGT TGCCCGGGAC ACCGTTGTCC
ATCGTGCCGT TTCAAGGGGC TTCGGGCCGC GGGTTGACGG TCGCGCTCCG GCCGAAGGCC
GTGTATCTGG TGCAGGCGGA TGGCTCGCGC GCCCGCGGCG CGGACAGCCT GTTTGCGGTA
TTTCCCGGCG TGCTCAGCGC GGAGGGGACG TTTCAAGCCA TCTTGCACCC AGAAGTCATG
AATGGAGTGG ATGACGATGT ACGCGTTCCA GTTTCTCGAG ACCAAGCGCC GCCTCGCGCT
CCTTCGGCTT CGCCTCCTGT ACATCCGCCT GCGAATTCGC CTCCTGGGTC AGCCGGATGA
 
Protein sequence
MQALPVVYID IVWMVNFIMD FALLWTTGWL MKRRARWTRL LAGALVGATY ALALFVPALS 
LATTWPGKAL VSVLMVWVSL PHRSALDLAR LVGVYYLVSF VVAGASVAAR FALPGTTLNH
ALWSDRGVAF ATSGETLGLM IGLPLAVDGL KRLAARLRKD ARVETSLVDL EVQFDEIVIR
CRALVDTGNA LVDPVSKRPV SLVDADVLMP AFPEPVREKL AVGADLLDAL TEALPGTPLS
IVPFQGASGR GLTVALRPKA VYLVQADGSR ARGADSLFAV FPGVLSAEGT FQAILHPEVM
NGVDDDVRVP VSRDQAPPRA PSASPPVHPP ANSPPGSAG