Gene Aaci_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1192 
Symbol 
ID8424693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1233502 
End bp1234110 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content54% 
IMG OID645027305 
Productdiguanylate phosphodiesterase 
Protein accessionYP_003184612 
Protein GI258511178 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTTTGC GTAAACAGCC CATTGTACGT TTGATGGATC GGTCGACCTA CGGCCATGAG 
ATCCTGTTGG CGCATCCGAA AGATACCTTG GGACTCATGG CCGATGCGGG CTTGTTGGTC 
GATCTGGATC GGTACATTGT CGACACAGCT CTGCATCTGG CGCGAACCCA GCAAACCAGG 
GTGTTCGTCA ACGTCACGGC GGAGCTTTTG GCAACACAAC ATTTACCTTT TGCCCCGGAC 
GATGATTTGA CGGGACTTGT CCTTGAAATC ACCGAACGCA GCCGCCTCGA CATCGAGGCG 
GTCGCTTCGT ATTTGGCACC CTACCGAGAA CATGGATTGC GGATCGCTTT AGATGATTTT 
GGTAATGGCT TCAATGGATT ACTGCGGTGG ACAACGTTGC GACCGGATTT TGTGAAAGTT 
CGCCTGTCGA GCGGAATGGA GTTCTTTCTC CCCTTGATCA TGGACGCTGC GGCGCAGCTC 
GAGGCGGAGC TTGTGGTTGA AAGAGTTGAA ACCCATGAAC AGGATATGTG GCTCAAGAAG 
TTGGGTGTGA CGTACGGACA GGGGTTCTTC TACGGGCGAC CGGTCCCGAT GGAGGGAGGC 
GCAGCATGA
 
Protein sequence
MSLRKQPIVR LMDRSTYGHE ILLAHPKDTL GLMADAGLLV DLDRYIVDTA LHLARTQQTR 
VFVNVTAELL ATQHLPFAPD DDLTGLVLEI TERSRLDIEA VASYLAPYRE HGLRIALDDF 
GNGFNGLLRW TTLRPDFVKV RLSSGMEFFL PLIMDAAAQL EAELVVERVE THEQDMWLKK 
LGVTYGQGFF YGRPVPMEGG AA