| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1190 |
|---|
| Symbol | |
|---|
| ID | 8424691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 1231271 |
|---|
| End bp | 1232440 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645027303 |
|---|
| Product | Flp pilus assembly protein ATPase CpaE-like protein |
|---|
| Protein accession | YP_003184610 |
|---|
| Protein GI | 258511176 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGCGC TTCTTTGTGC GAGCTCATCC GAAGAGATCC TGGCACAGTG TGAAGGGATT
TTAGACCTGC GTCTTTTCAC CACCATGTCC GAATTACGAC GATACGCGGC CATAGGGGAT
GTGGAAGGGA TCCTGATCGA TGCGCGATTA GGCGTAACCA CCGCCATTCG CGAACGGCTA
CCCCAGATTC CGATTTTCGA ATTCACCTTA CCATTTGACC TGTCGGCGGT GATGCGGTGG
ACGGAGCAGA TGCGCAGCCA ACGGACGAGC GAAAACCCGC AGCCCGTCGC TACGATGGAG
AACGTCGAAG TTGCGCCGTC CGCCACACCT TCGTCGTTGC CGCCGATCCA GGAGGCTAAG
CCGCCGTATG CAACCGTAAC CCTGAACGCA GTTGAAGGAT TTCGACACAC CGTGACGCCT
GGGGTTCGTC GGCGAACTGT GCCTGTCATC ATGCTGGACA GTCCCAAAGG GGGTGCGGGG
CGCTCGACGC TCGGTGCGCA CACGGCATAT TATGCCGCGT TGCGTGGCAA ACGTGTGGCG
GTGATTGACC TCGACATGAA CGGTGACATC GCACAAAAGT TTGGGTTCGC AGATGCTCCA
GATGTCCGGG GATGGCGAGG TCGTTCGGTG GAAGAAGCCG TTCGAGACGG GATCTGTCTG
GTTCATGAGT CCAGTGTGCA CATCTTCCCA TCGCCGCAAA GCCCGGAAGT CGTCTTGCAA
GATCCGACAG ATGCGGAGTA TCTCTTGAAT CTGTGTCTTG AAGAGATGGA CGTCGTTCTG
TTGGACATGC CACAAGGATG GACACCGATC CATCAAGCGG TACTGCCCTA TACGACGCAA
GTGCTTTTCG TGGTGGTGCC TGCGGTCGAT CAACTCGCTC GGATCCAGGA GCATGCAGAC
AAGCTTGTGT TTGCGGGGTT GTCGAACCAT GAGGTGGCAC CCATCCTGAA CAAAGCCAAA
AGGGTTCGGG CCGATGAGCG CGCGATGCAA CACTATCTGT TGCCGTTTTC GATCCGCTCG
GTGGTGCCGT TCGATCCGAC GATTGACAAA CGCGGAGGCG TGAATGGCAA ACGGATCGTT
CAGGCCATGC GGCCATTTTG GGACGAAGTG CTGGGATGGT CTGCAACGCG AGAGAGGCGG
CGGTGGTTTG GATTCCTGCG CAAGGCATGA
|
|---|
| Protein sequence | MLALLCASSS EEILAQCEGI LDLRLFTTMS ELRRYAAIGD VEGILIDARL GVTTAIRERL
PQIPIFEFTL PFDLSAVMRW TEQMRSQRTS ENPQPVATME NVEVAPSATP SSLPPIQEAK
PPYATVTLNA VEGFRHTVTP GVRRRTVPVI MLDSPKGGAG RSTLGAHTAY YAALRGKRVA
VIDLDMNGDI AQKFGFADAP DVRGWRGRSV EEAVRDGICL VHESSVHIFP SPQSPEVVLQ
DPTDAEYLLN LCLEEMDVVL LDMPQGWTPI HQAVLPYTTQ VLFVVVPAVD QLARIQEHAD
KLVFAGLSNH EVAPILNKAK RVRADERAMQ HYLLPFSIRS VVPFDPTIDK RGGVNGKRIV
QAMRPFWDEV LGWSATRERR RWFGFLRKA
|
|---|
| |