Gene Aaci_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_1062 
Symbol 
ID8424562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp1130843 
End bp1132018 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content51% 
IMG OID645027180 
Productintegrase family protein 
Protein accessionYP_003184488 
Protein GI258511054 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.489924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACAACGG GCCGAGTATT CTCATACACA ACCAAGTCGA ACGAAAAAAA GTACGGATAT 
ACGATTACCA TTACGCCCGC GGACCCACAA ACAGGAAGGT ACCCTCAAGT GACTCGAAAG
GGCTTTAAGA GCGAACGAGC TGCAAAGTCC GCCATGATGG AGCATCTGCG TTCGCTCGAA
GACACTCCAG TCGTACATGC CAAATCGTTC ACTTTACATG AATGGGCAAG TCGCTGGTTT
GCCGATAAAT CGTCATCCTT GCGGCCGTGG ACGCGTCGAA CTTATCATCA TGTCTTGCAA
GCCTACATTC TCCCCGAACT TGGTAAGATG CCGATCTCAA AAATTGAGGC CCGACATATC
CAAGCACTAT ATCGCAAGCT AAGCAATCGA TTGAAACCAG TGACCGTACA TCGAATACAC
CGGGTGCTCA AGACGTGCTT ACTTGCTGCG GTGAAAGCAG GATACTTGGA TAAGTCTCCG
TTCTTGAACG TAGAACCACC AGAACATAAA ACGCCTCCGA AGCCAGTTTT GTCTGTGAAC
GACGCCTTTC GGCTCTTAGC GTGGCTACGA GAACATCGAC CAACGAGCTA TATGGCGGCG
TTCTTGGCCA TTCATACCGG CATGCGCATG GGGGAGATCG CTGGGCTGCA ATGGAGAGAC
ATCGATTTGG ACACGGGCGT GATACAACTT GAACGAACTC GCTACAGGCC CAAGGGTGGG
CAAGACTTTT TGGGGCCGCC CAAGACATTT GGAAGTCGTC GCCGTATTGT CGTCACGCGA
GAAGTAGTGG ACGAACTCAG GAGATGGAAA CAATCGCAAC AAGAAATCGA GCGCGAATCT
TGGACTCCTG AATCCTTTGT CGTTCGCCTC CCAAACTCCG CGCCCCCGTC ACCCGCTTCC
TTTAACAACG CGATCCAAAA CGCAAGAAAA GAGCTTGGGT TGCCGCCCGT TTCCTTTCAT
GGATTGCGAC ATACCCATGC GACGTGGTTG CTAGAAAGCG GGGTCGATCT CAAAATTGTG
AGCGAACGTT TGGGGCATAG TTCAATTACG ATAACGGCAG ACATATACGC GCATGTGACG
GATGCGCTAC AACGCGAAGC GATTGAAAAA CTGCAACGAA TGATGCGTTC AAGACGCACA
AACAACAGTG GCTCTGATGA TGAAGAGGAC TTGTAA
 
Protein sequence
MTTGRVFSYT TKSNEKKYGY TITITPADPQ TGRYPQVTRK GFKSERAAKS AMMEHLRSLE 
DTPVVHAKSF TLHEWASRWF ADKSSSLRPW TRRTYHHVLQ AYILPELGKM PISKIEARHI
QALYRKLSNR LKPVTVHRIH RVLKTCLLAA VKAGYLDKSP FLNVEPPEHK TPPKPVLSVN
DAFRLLAWLR EHRPTSYMAA FLAIHTGMRM GEIAGLQWRD IDLDTGVIQL ERTRYRPKGG
QDFLGPPKTF GSRRRIVVTR EVVDELRRWK QSQQEIERES WTPESFVVRL PNSAPPSPAS
FNNAIQNARK ELGLPPVSFH GLRHTHATWL LESGVDLKIV SERLGHSSIT ITADIYAHVT
DALQREAIEK LQRMMRSRRT NNSGSDDEED L