| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1027 |
|---|
| Symbol | |
|---|
| ID | 8424519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | - |
|---|
| Start bp | 1096805 |
|---|
| End bp | 1098175 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645027138 |
|---|
| Product | domain of unknown function DUF1727 |
|---|
| Protein accession | YP_003184454 |
|---|
| Protein GI | 258511020 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.964533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGGCA TCTGGATCGG CAAGTTCATC CTGTGGGTGC TCAGGCTGCG CGGCAGAGAC
GCCACCAGTT TGCCGGGTAA AGTGGCGCTC AGAATCTCCC CCGGCCTCAT CCGGCGCTTC
GGGGGACAGG TGAAGCGGGT CATCGCGGTC ACCGGCACCA ACGGAAAGAC GACCACGACC
TCCCTCCTGG CGAGCATGGT CGCCGAGCGC GAACCTGTGG TGACCAACCA CAAAGGGGCG
AACCTCGCCC AAGGCATTGC CACGGCGTTT TTGCGGTCCT GTTCGTGGAC GGGCAGGCTC
CCCGCGAGCA CGGCGGTCTT GGAGATCGAC GAGGCGACGC TGCCCGCCGT CGCGCCGGAC
CTGCCGATTG GCGTCATCGT CGTGACGAAC GTGTTTCGCG ATCAGTTGGA CCGATACGGT
GAGTTGGATG GCACGTTGGC GAAGCTCTTG GAAGGCATCC GAAAGACGCA GGCGACGCTC
GTCCTGAACG GGGACGATCC GCTCTGCCGG TACCTCGGCC TTCGCTCCTC GCGTAAGGTG
ATCTACTACG GCATGGCTCG GGACACGGCG AGATCGCCCC GGCGCGAGCA GATGCGCGAC
GGACAGTTCT GCCTGATGTG CGGACGGCCG CTTCGATACG ACGGGTTCTG GTACGGTCAG
CTCGGCCTGT ATCGGTGCGA GGGCTGCGAC TTTGTTCGCC CACACCCCGT GTTTCAGGGC
GAACTCCAGG GAGGGTTCCT GCGCTTCACC GAAGAAGGGC TGCCGGACCT CCTGCTCGAT
CTCCCCGTCT CGGGCCTGTA CAACGCGTAC AACGTCCTCG CTGCCGCCTC TGCGGCGCGC
GCGCTTGGGC TCACGAGCGC CGCTATCCAC GGAGGGCTTC GCGCGTACCG CCCGCCGGAG
GGGCGCATGC AGCGCTTCGA CCTCGAGGCG CCTGTGACCC TTCACCTGAT CAAGAATCCC
ACGGGCTGCG ACAGCGTTCT CGATACCGTG GTGTCGGATG GAAGGGATAA GGTGGTCGTC
ATTGGGGTGA ACGACCTCGC GGCCGACGGG CGAGACGTGT CCTGGCTTTG GGACGCCGAC
TTCGAACTGC TCGCGGAGGA CCCCCGGCTG ACGGCCGTGG TGACGACAGG TTTTCGCGCG
CACGACATGG CGCTCCGGCT GAAATACGCG GGCCTTCCGG AATCCAGGAT CCGCGTCGAG
CCCGACCTGG AGGCTGCGCT GCAAGAGGGG CTCTCCCAGA GTTCCGCCAC CGGCGCCGCC
ATGCACGCGC TCGTAACCTA CACGCTTTTG CACCCCGCGG CCCGCTGGCT TTCGGAAAGA
AGGGATGAGC ATGAGCCGCA AGGCGCTCTG TATCGCACAT CTGTATCCTG A
|
|---|
| Protein sequence | MLGIWIGKFI LWVLRLRGRD ATSLPGKVAL RISPGLIRRF GGQVKRVIAV TGTNGKTTTT
SLLASMVAER EPVVTNHKGA NLAQGIATAF LRSCSWTGRL PASTAVLEID EATLPAVAPD
LPIGVIVVTN VFRDQLDRYG ELDGTLAKLL EGIRKTQATL VLNGDDPLCR YLGLRSSRKV
IYYGMARDTA RSPRREQMRD GQFCLMCGRP LRYDGFWYGQ LGLYRCEGCD FVRPHPVFQG
ELQGGFLRFT EEGLPDLLLD LPVSGLYNAY NVLAAASAAR ALGLTSAAIH GGLRAYRPPE
GRMQRFDLEA PVTLHLIKNP TGCDSVLDTV VSDGRDKVVV IGVNDLAADG RDVSWLWDAD
FELLAEDPRL TAVVTTGFRA HDMALRLKYA GLPESRIRVE PDLEAALQEG LSQSSATGAA
MHALVTYTLL HPAARWLSER RDEHEPQGAL YRTSVS
|
|---|
| |