| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_1009 |
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| Symbol | |
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| ID | 8424501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013205 |
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| Strand | + |
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| Start bp | 1079134 |
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| End bp | 1082253 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 645027120 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003184436 |
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| Protein GI | 258511002 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0533804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTCC ATCTCCACTG TCATTCTCCC TATTCGTTTC TCGACGGGGC CTCCAGCATC
GAGGCGCTGG TCGCGCAGGC GGCCGCGCAG GGTATGCCTG CGTTGGCCTT GACGGATCGA
AATACCATCG CGGGTCAACC CGAGTTTCAT CGGCTGGCCG CCGCGTACGG CGTGAAGCCC
ATCGCGGGCG CGGAGCTGAC GATGGAGGAC GGCTCGCAGC TTGTGGTCCT GGCGGAACAT
GCGACGGGGT TTCGCCATCT ATGCGAGCTT CTCACGCGCA TGCACGTGGA CGCTCGGGAT
CGCGCGGATC CCAGGCTGCG GGAAGCGGAT CTGTTCGAGC GGAGCGAAGG GCTCCTCATC
TTGTCGGGCG GACTGCGCGG GTTCGTCCAG CGCGCCTTGG CGCGGCGCGC GTACGGTGAC
GCCCGGCGGT TCGTGGAGCG ATATCGGAAT GTGTTCGGGG ATCGGTTTTA CCTCGAGTGG
ACGGCCGACG GGCTCCCCGG CTGCGCGCGG CGCATGCGGG ATTTGCTCGA TCTCGCCGAG
GCGACGGGCG TGCCCGCCGT CGCGGCGACC GAGGTTCGCG CCGCCAGCCC GGAGGAAGTG
GCGGTGCACG ATGTGCTCAC CTGCATCCGG GTGGGGTGCG ATCTGCAGAC GCCACACCCT
GAGCGCCCGT TTAACCGCCT GGGGTATTTG CACGACGAGG CCGAAGCGAT GCGCAGATTC
GCGCAAGATC CTCGAGCCAT GGCGCGGACG GTCGAGATCG CCGAGCGGTG TTCACCCGTG
TTTCCCGCGG AAGGACCTCT GTTTCCCGAA TACCGAGATG CGTCGGGGCG AGGCGGGGTG
GAACTTCTCG AGCAACTCGT GTGGCAGGGG GCGCGGAAGC GATACGGAAA GGTGAGTCCC
GAACTTCAAA TGCGCCTGGA ACACGAGTTT GCCATCATTC GCGATCTCGG CTATGCCGAT
TACTTCCTCG TCGTTTGGGA CATCGTCCGA TATGCGAGGT CTCGCGGCAT CCGCTGCGCG
GGCCGCGGCT CTGCGGCCGA CTCCGTGGTC GCGTACTGCC TCTATCTGAC GGATGTGGAC
GCGCTGAACC GAAATCTGCT CTTTGAGCGA TTTCTCTCGC GCGAGCGAGC GGAGCGGCCG
GACATCGACA TCGACTTTGC GAGCGATCGC CGGGACGAGG TCATCGACTA CGTGTACCGG
CGCTACGGGC GCGATCGCGT AGCGCGGGTG GCGACGTATC AGACGTTTCG CGCGAGATCC
GCCGTGCGCG AGGTGGGGCG CGTTTTCGGG ATCCCCGAAG AGCTCCTGGA TCAGTTGGCC
AAGCGAATCC CGTGGTCCAC GCACGCCGAC GAAATTGAAG AGGCGCTGGA GCGGGTGCCC
GAGTTGCGGG ATTTTCAGCC TTATCGGCGC GCGTTTCAAT GGATGTTGGC CGTCTCACGC
CAGATCGCGG GATTCCCTCG CTACTTCGGG ACGCACACCG GCGGGATCGT CATCAGCGGG
GAGCCGCTGA TGAAGGTCAC CAGCTTGCAG CCATCGGCCT CGGGTTGGTT GATCACGCCG
TACGACAAGC GGCTCCTGGA AGACGTGGGC CTCGTGAAGC TCGACCTCTT GTCCCTTCGA
ACCATGGCGG CTGTGGAGGG GGCGCTCCGC CTCGGCACGG CGCGCGCGGT CGATTACGAT
CACATCCCCA TGGACGATGA GGCCACGTTT GCCTCCATTC GCCGCGGGGA CACCATCGGC
GTCTTTCAGC TGGAGAGCCC CGCGCAGCGG GCGCTGCAGG TTCGGCTTGG CGCGGAATCC
CTGGAGGACT TGGTGGCGAG CGTTGCGCTC ATTCGCCCCG GGCCCATCCA GGGCAATATG
GTCGATCCGT TCCTGGCTCG CCGGCGCGGA CTGGAGCCTG TGAGTTATCT TCATCCGAAA
CTTGAACCCA TTCTCGGCAA GACCTACGGC GTGGTGTTGT TTCAGGAGCA GGTGATCGAG
ATTGCCACCG CTATCGCGGG TTTTACGCCG GGCGAGGCGG ACGAACTCCG CCGCGTGATG
AGCCATGCGC GCAGCCGCGC CGAAATGGAG CAAATCGGCG AGCGATTCGT CCAGAAAGCC
GTGCGCCAGG GTGTGCCGCT CGAGACCGCG AAGACCCTCT TTTCCTACGT CCGCGGCTAC
GCGAGTTACG GATTTTGCGA GGCGCACGCG GCGGCATTTG CCACCACGGC CTACAAGACG
GCCTATCTCA TCGAACATCA TCCGGCGAGT TTCTTCGCGG CGGTGCTGAA TCAGTTGCCC
ATGGGGTATT ATCCGGCGCA CGTGATCTGC GCGGAAGCTC GAAGGCGCGG CGTTCGAATT
CTGCCTGTTG ACATCAATGA GAGCGAATGG GACGCAGGCG TTCCCGAACC GGACGCCATA
CGCCTCGGAT TTCGGCTCAT CCGTTCGTTC TCGGAGCGCG TGGCGCGCGC ACTCGTCGAA
GAGCGGCAGG CTTTTGGCTC CTTTCGAAGC CTTGCCGATG CGGTGATGCG CCTGCCCCAG
GCGGACGCCC TTCACTTCGA GCGCCTGATC CGCGCAGGCG CATTCGATCG CGTCGAATCC
CGGGATCGCC GAGAGCTCCT GTGGCAGCTT CCGAGGTGGC TCGCGCTTCG AAAGGAGAAA
GCTCTGGCGC TCTTCGACAC CATCTCAGCT CCAAGCCCAG CGGAAGACGC GATTCGCCTC
CCGCAAAGCA TGCCGCCCAT GAGCTTGGCC GAGCGCATTG CCGACGAGTA TTCGGTGTTG
GGCGTCGGCG TGAGTGGACA TTGGCTGTCG CTGTATCGGG AGGCACTTCG AAACGAGGGG
TATTGCACGC TGGCCGAGGC GGGCGAGAAG CGGGAGGGTG CGAGGGTCAA GGTGGCTGGG
CTTTCGATCC GGCCGCATCG ACCCCCGACG AAAAGCGGAA AGACGGTCGT CTTCTTCACT
TTGGAGGACG AGACGGGGAT CGCGGATGCC GTAATGTTTG AGACCGTGTA CCGCCGCGAA
GGGGCCGTGT TGTTCACGCC GTTCGGGAGA TTGATCGGCC TGTCGGGCGT GATCGAGCGG
CGCGGAGGGC TCAAGGGGCA GATCCGCGTC GAGCACATCT GGACCCTCGC ATCCGGCTGA
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| Protein sequence | MFVHLHCHSP YSFLDGASSI EALVAQAAAQ GMPALALTDR NTIAGQPEFH RLAAAYGVKP
IAGAELTMED GSQLVVLAEH ATGFRHLCEL LTRMHVDARD RADPRLREAD LFERSEGLLI
LSGGLRGFVQ RALARRAYGD ARRFVERYRN VFGDRFYLEW TADGLPGCAR RMRDLLDLAE
ATGVPAVAAT EVRAASPEEV AVHDVLTCIR VGCDLQTPHP ERPFNRLGYL HDEAEAMRRF
AQDPRAMART VEIAERCSPV FPAEGPLFPE YRDASGRGGV ELLEQLVWQG ARKRYGKVSP
ELQMRLEHEF AIIRDLGYAD YFLVVWDIVR YARSRGIRCA GRGSAADSVV AYCLYLTDVD
ALNRNLLFER FLSRERAERP DIDIDFASDR RDEVIDYVYR RYGRDRVARV ATYQTFRARS
AVREVGRVFG IPEELLDQLA KRIPWSTHAD EIEEALERVP ELRDFQPYRR AFQWMLAVSR
QIAGFPRYFG THTGGIVISG EPLMKVTSLQ PSASGWLITP YDKRLLEDVG LVKLDLLSLR
TMAAVEGALR LGTARAVDYD HIPMDDEATF ASIRRGDTIG VFQLESPAQR ALQVRLGAES
LEDLVASVAL IRPGPIQGNM VDPFLARRRG LEPVSYLHPK LEPILGKTYG VVLFQEQVIE
IATAIAGFTP GEADELRRVM SHARSRAEME QIGERFVQKA VRQGVPLETA KTLFSYVRGY
ASYGFCEAHA AAFATTAYKT AYLIEHHPAS FFAAVLNQLP MGYYPAHVIC AEARRRGVRI
LPVDINESEW DAGVPEPDAI RLGFRLIRSF SERVARALVE ERQAFGSFRS LADAVMRLPQ
ADALHFERLI RAGAFDRVES RDRRELLWQL PRWLALRKEK ALALFDTISA PSPAEDAIRL
PQSMPPMSLA ERIADEYSVL GVGVSGHWLS LYREALRNEG YCTLAEAGEK REGARVKVAG
LSIRPHRPPT KSGKTVVFFT LEDETGIADA VMFETVYRRE GAVLFTPFGR LIGLSGVIER
RGGLKGQIRV EHIWTLASG
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