Gene Aaci_0997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0997 
SymbolispH 
ID8424489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1068280 
End bp1069254 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content64% 
IMG OID645027108 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_003184424 
Protein GI258510990 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0965539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGTCG TCAAAATTAC GCCGCGCGGC TACTGTTACG GCGTGGTGGA CGCGATGGTG 
ATCGCCAAGC GGGCGGCGGA AGACAAGCGT CTGCCGCGAC CCATCTACAT CCTGGGCATG 
ATTGTGCACA ACCAGCACGT CGTGGACGCG TTTGCGCGCG AAGGCGTGAT CACCTTGGAC 
GGCGCGGATC GCTTGTCGCT GCTCGAGAAG ATCGATCGCG GGACGGTCAT CTTCACCGCG 
CACGGCGTGT CGCCGGAGGT GAAGCGGAGG GCGCGGGAGA AGGGCCTGAC GGTGCTCGAT 
GCGACTTGCC CAGACGTCAA CCGAACGCAC GAGCTGATCC GGGAAAAGGT CGCGCAAGGG 
TACGAAATTG TCTACATCGG GCGGCGGGGC CATCCCGAGC CGGAGGGCGC CATGGGCGTC 
GCGCCGGGAC ACGTGCACCT CGTGGAAAAC AAGGAAGACA TTGAAGCGCT GTCGCTTCAG 
ACGGATCGGA TTGTGGTGAC GAATCAGACC ACCATGAGCC AGTGGGACAC CCGCGAACTG 
ACGGAGATGG TGTGCCGCAA GTACCCCACG GCCGAAGTGC ACAACGAGAT TTGCCTCGCG 
ACGCAGCTGC GCCAGCAGGC GGTTGCGGAA CAGGCGGGCC AGGCCGACTT GTGCATTGTC 
GTCGGGGATC CGCGCAGCAA CAACTCCAAC CGCCTGGCTC AGGTCGCGGA GGAGATCGCC 
GGGGTCAAGG CGTATCGGGT GGCGGACGTG ACGGAGATCA ACCCCGAGTG GCTGATGAAC 
GCCAAGCGGG TGGCGGTGAC CTCCGGCGCG AGCACGCCGA CGGCGGTGAC CAAAGAAGTC 
GTGGACTACC TGGAGCAGTT CGATCCGGCC GATCCATCGA CCCATCGGCC GAAGCGCACG 
CTCGACCCGA ATCGAATTCT TCCCGTGTTG CGAAACGAGC GCATTCGCCA AGGCGTGGAG 
CGCGAGGCGA CATGA
 
Protein sequence
MEVVKITPRG YCYGVVDAMV IAKRAAEDKR LPRPIYILGM IVHNQHVVDA FAREGVITLD 
GADRLSLLEK IDRGTVIFTA HGVSPEVKRR AREKGLTVLD ATCPDVNRTH ELIREKVAQG 
YEIVYIGRRG HPEPEGAMGV APGHVHLVEN KEDIEALSLQ TDRIVVTNQT TMSQWDTREL 
TEMVCRKYPT AEVHNEICLA TQLRQQAVAE QAGQADLCIV VGDPRSNNSN RLAQVAEEIA 
GVKAYRVADV TEINPEWLMN AKRVAVTSGA STPTAVTKEV VDYLEQFDPA DPSTHRPKRT 
LDPNRILPVL RNERIRQGVE REAT