Gene Aaci_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0972 
Symbol 
ID8424464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1046153 
End bp1046785 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content59% 
IMG OID645027084 
ProductSNARE associated Golgi protein 
Protein accessionYP_003184400 
Protein GI258510966 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.764938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCACTTTC AGGAGATCCT TCAGCATTAC GGTTATGCGG GCGTTTTCTT CATCATCTTC 
GTCGAGGCCA TCGGATTTCC GTTTCCGGCT GAGACGACGC TGACACTCGC CGGGATCGAA 
TGGTCCAAGG GCGTGTTTCA CCTGGTCCCC CTTTGGTTGA TGGGGTGTCT CGGCAACCTC 
GTCGGCTCCG CGGTGGCGTT TTTCATCGGC TGGTTTCTGG GACGCCCGGT GGTTTTGTAC 
TTCGGCAAGT ACGTCGGGAT CACGGACAAG AAGCTCGACA TGGTGAACGA ACGTTTCCAG 
CGCTACGAGT TGGCCGTGAT CTTCATCGCC AAGTTCATCG CCGGCGTGCG CATCATCGTG 
CCGTATCTGG CGGGCATCAA CCGCATGAAT CCCGCAAAGT TTTTCACCGT GAACACCATC 
GCCGCCATCG TGTGGTCGGG CGCCTTCATC ATCGCCGGGA AGTACATCGG CGAGGAAGTG 
AGCCGCTACT GGCCGTTCCT CAAGCACCAC CTCTGGCTTG CGGCCATCCT CGCCGCGATC 
GTCGTAGCAC TCCTCCTCGC GTTTCGCAGG TGGGAGCGTA AAAAGATGCA CGGGTCGGCG 
CCCGATGCCA AACGAGACGG TGCCGAGCGC TGA
 
Protein sequence
MHFQEILQHY GYAGVFFIIF VEAIGFPFPA ETTLTLAGIE WSKGVFHLVP LWLMGCLGNL 
VGSAVAFFIG WFLGRPVVLY FGKYVGITDK KLDMVNERFQ RYELAVIFIA KFIAGVRIIV 
PYLAGINRMN PAKFFTVNTI AAIVWSGAFI IAGKYIGEEV SRYWPFLKHH LWLAAILAAI 
VVALLLAFRR WERKKMHGSA PDAKRDGAER