Gene Aaci_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0942 
Symbol 
ID8424435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp1017724 
End bp1018167 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content56% 
IMG OID645027055 
ProductPilT protein domain protein 
Protein accessionYP_003184371 
Protein GI258510937 
COG category[R] General function prediction only 
COG ID[COG1569] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID[TIGR00305] probable toxin-antitoxin system toxin component, PIN family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.510473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGTGG TTCTGGACAC GAACGTCTTG ATCTCGGGAC TCCTGCTCCC TAACCGTGTA 
TCAGGGCGTA TCGTGCAAGC GTGGCGGTCT GCCCAATATA CGCTCGTGGT ATCTGAGTCC 
ATGCTGGACG AACTTGAACG AGTACTCAGT TACCCAAAGA TCCAACGACG TCTGCAATGG 
TGCCCGGACG AAATACGCCG CTTCGTGTCG CTGTTTCGAT ACTATGCGGA TGTCATCGCT 
GTGGACGAAG GCTCATGCGT AGAGCTCAGA GACAGCCTGC GTGACGGCAT GGACGTGCAT 
GTTCTTGCCA CGTGCATCGC CGGCAAAGCG AATTGGCTCG TTTCGGGCGA CGAAGCGTAT 
TGGTCGTCCG TGACCGATAC CCTGTGCGGA GCCCGGCTGA GTTTGTTACC ATGCTGGGCC 
CTTGATATGT GTGCATCCCC TTAG
 
Protein sequence
MRVVLDTNVL ISGLLLPNRV SGRIVQAWRS AQYTLVVSES MLDELERVLS YPKIQRRLQW 
CPDEIRRFVS LFRYYADVIA VDEGSCVELR DSLRDGMDVH VLATCIAGKA NWLVSGDEAY 
WSSVTDTLCG ARLSLLPCWA LDMCASP