Gene Aaci_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0903 
Symbol 
ID8424396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp977872 
End bp978849 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID645027016 
ProductTransketolase central region 
Protein accessionYP_003184332 
Protein GI258510898 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.700297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAGT GGACGATGAT CGAGGCCATT CGGGATGCGC TGGCCATCGC CCTTCGCGAC 
GATCCGCGCG TTCTCGTCTT CGGCGAGGAC GTAGGGAAAA ACGGCGGTGT CTTCCGCGCC 
ACGGACGGGC TGCAGGCCGA ATTCGGCGAA GCGCGCGTCG CCGACACGCC GCTCGCGGAG 
AAGGCCATCG TCGGAACGGC CGTGGGCCTC GCCATGGCGG GCATGAAGCC CGTCGCCGAG 
ATCCAGTTTC TCGGCTTTGC CTACGAGGCG ATGGATCAGA TCGCCGCGCA GCTCGCGCGC 
ATCCGCTTCC GCACGCAGGG ACGGTTCACG GCCCCCGCGG TCATTCGTGC CCCATACGGA 
GGTGGCGTGC GCACGCCGGA GCTGCACTCG GACAGCCTGG AGGCGCTCTT TGCCCACACG 
CCGGGGCTCG TCGTCGTGAC GCCTAGCCGT CCGTACGACG CCAAGGGGCT TTTGCTCAGC 
GCCATCCGTT CGCCCGATCC CGTCGTCTTC CTGGAACCCA TCAGGCTCTA TCGCGCCTTC 
CGGGAAGAGG TGCCTGAGGG AGACTACCAG GTGCCGCTCG GCCGGGCGGC CGTCCGCCGC 
GAGGGCTCGG ACGTCACGCT CGTCGCCTGG GGGCCCACCG TGCCGGTGGC GGAATCGGCG 
GCAGCCCAGG TGGCATCCCG GGGGATTTCG TGCGAGGTTC TGGATCTGCG CACGCTCGCG 
CCGCTCGACC GATCCGCCCT CAAAGCGTCC GTGGAGAAGA CGGGCCGCGC CGTCATCGTC 
CACGAGGCGG TGCGGTATGC CGGGCTCGGC GCCGAGATCG CCGCCTCCAT CATGGACCTG 
GCGTTTTACC ACCTGCGGGC GCCCATCGAG CGGGTGGCCG GGCTCGACAC GCCCTACCCG 
CCGCCCGCGC TCGAGGACGC CTGGCTCCCG AGCGTGACGC GCGTCGTCGA GGCCATCGAG 
CGCGTCATGG AAGATTGA
 
Protein sequence
MPKWTMIEAI RDALAIALRD DPRVLVFGED VGKNGGVFRA TDGLQAEFGE ARVADTPLAE 
KAIVGTAVGL AMAGMKPVAE IQFLGFAYEA MDQIAAQLAR IRFRTQGRFT APAVIRAPYG 
GGVRTPELHS DSLEALFAHT PGLVVVTPSR PYDAKGLLLS AIRSPDPVVF LEPIRLYRAF 
REEVPEGDYQ VPLGRAAVRR EGSDVTLVAW GPTVPVAESA AAQVASRGIS CEVLDLRTLA 
PLDRSALKAS VEKTGRAVIV HEAVRYAGLG AEIAASIMDL AFYHLRAPIE RVAGLDTPYP 
PPALEDAWLP SVTRVVEAIE RVMED