Gene Aaci_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0889 
Symbol 
ID8424382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp962383 
End bp962829 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content63% 
IMG OID645027002 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_003184318 
Protein GI258510884 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR00848] PTS system, fructose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.274774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACGC GCGAGCACGT GTGCTTTCTG GACGAGTCTG TTGCGACGCG AGCCGACGTC 
ATTCGGCGGA TGGTGGAACT GGCTCACCGC TCGGGCCACG TGGAGGACGT CGGTCGCGCC
GTGGAAGCCG TGGAGCACCG TGAACAAGAG GGTACGACCG GATTTGGCAA GGGCATTGCC
ATTCCGCACG GCAAGTCCTC CGCAGTGCGG AAGGCCGCGC TGATGTTCGC CCGGTTGGCA
AAGCCAGTGG ACTGGAACAG CCTGGACGGC GCTCCCGTCG ACACGGTGTT CCTCATTCTG
GTGCCGGAAG GCGCTCACGA TGACCACCTT CGGCTGCTGT CAAAACTTGC GCGCAAGCTC
ATGCACGATG ACTTTGTGAG CGCACTGCGA GAGGCGAACG AGGTGGACCA ACTCGTGGAT
ACCATCCGCG GGGCGCTCGA GGACTGA
 
Protein sequence
MLTREHVCFL DESVATRADV IRRMVELAHR SGHVEDVGRA VEAVEHREQE GTTGFGKGIA 
IPHGKSSAVR KAALMFARLA KPVDWNSLDG APVDTVFLIL VPEGAHDDHL RLLSKLARKL
MHDDFVSALR EANEVDQLVD TIRGALED