Gene Aaci_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0881 
Symbol 
ID8424374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand+ 
Start bp956006 
End bp956695 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID645026994 
ProductLmbE family protein 
Protein accessionYP_003184310 
Protein GI258510876 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.683362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAG TGGAAAAGAC TCGTCACTTG CTGCTCGTGT ATCCCCATCC AGACGACGAG 
TCGTTCGGCA AGGCCGGGAC CGTGATCCTG TTCACCCGCG CGGGCACGCC CGCCACCCTC 
ATCTGCGGCA CGCTCGGCGA GCTGGGGCGC AACATGGGCA ACCCTCCCAT CGCCAACCGG 
GAGACCCTCC CGAAGATTCG GCGGAAAGAA CTCGAACAGG CGTGCGAGAT CCTCGGCATT 
CGCGATCTCC GGCTGCTCGG CCTGCGGGAC AAGACCGTCG AATTTGAGGA TCCCGAGCGG 
ATCGCGGATC GGATCGAAGC CGTCATCCGC GAGGTGAAGC CGTCGATTCT GATGACGTAC 
TACCCGGGAC TCGGCGTGCA TCCCGATCAC GACGCCATGT CGAACGCGGC CGTGATCGCC 
GTGAAGCGGC TGCCCAAGGA GGAGCGGCCG GTCATCTGGG GCTCGGCGGT GGTCCACGAG 
CCCGAGAAGA TCCTGGGCGA TCCCGACTTT GTGATCGACG TGTCGAGCGT CCTGGATCAG 
AAGCTGGCGG CGATGAAGGC GCATCGCTCG CAGTTCTCGG GCATCTTCGC CCGGGTGGAG 
GAGGCGCTCG CCGCAGGCGG AGAAGCTCGG GAGGAGGTCC TGCGCCTCCT GGGGACGGAG 
CGGTACTGGG TCTACCGGAT CGACGATTGA
 
Protein sequence
MAQVEKTRHL LLVYPHPDDE SFGKAGTVIL FTRAGTPATL ICGTLGELGR NMGNPPIANR 
ETLPKIRRKE LEQACEILGI RDLRLLGLRD KTVEFEDPER IADRIEAVIR EVKPSILMTY 
YPGLGVHPDH DAMSNAAVIA VKRLPKEERP VIWGSAVVHE PEKILGDPDF VIDVSSVLDQ 
KLAAMKAHRS QFSGIFARVE EALAAGGEAR EEVLRLLGTE RYWVYRIDD