Gene Aaci_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0876 
Symbol 
ID8424369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp951792 
End bp953009 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content63% 
IMG OID645026989 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003184305 
Protein GI258510871 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGTGC GCATGCCGAA AAAGACAAAT GTTTCATCCT CGCTGCACGC CATCCGGGAA 
GTTCGCACCA GTTGGCCGTC TGTCACCTGG GACGTGCTGC AGCAACACCC CGTGGAACTC
GATTTCCGAG AAGTGGAAAG GGCGCTCGAC GGCGTGCGGG ATCGCCAAGC GTGGCTGGTG
GTCGTCGTCC GCAGTTCGCG CGTGGTGCCC ATTTACCCGT TCCTAGCGCA GATTCAGTCG
GCGGGCTTTG ACTGTGTGCA CCTGCTGTCT TGTGACGCGG CCGCCTACGT CATGACGCTC
GCCGCTCATC ACCCGGAGCG GGCCATGGAG GGTTTCGAGT CCGCACTCGC GAGATTGGCC
GCGGATCGGA CGCTCGTCGG CGTGAGTTCC GCGTGCGACG AGCGGGAGGT GGTGCGCTGG
TGGCAGGCGC TGATGGAGGC CACCGCCGCG TCGCACTGGA ACGTGTTTGA ATCGTCCGCC
TACTCGCAGG GAAGGCGCGA GCTGGTGCCG CTCCACGAAG AGGACAGAAC TCGGTTGATC
ACGCGGGCCG TCACCCAGCT CGGCGATCGC GGCTATGAGG GCATCGCGTC GGTCGTGGAG
GATTTGTTCG CGCAGTTGGC GGAGCGGCCG ACGAAGCTCG AAGACGTGGC GGAACTCTGC
GCTCAGTTCA TCATGGCGGC CGTCGGCCAG CGCCAGGCGG ATGGGCGGGA TCGGATGCTC
CAAGTTCCCA TCTCGACGCG CCAATGGCTT CGTTTTGTGG CCGAGGAATG CCCGAAATGG
TGGGATTGGC GCGACAAGCT GAAACAGGCG CTGATGGTGG TGCTCGGGCG CGAAGAGGCG
GTGCGCACCG CGCACAGCGC GCAGATCGGT CAGGTCATCG AGATCATCGA GCGGCACTAT
GACTCGGATC TCGATGTGGC GACGCTCGCG AGTCAGGTGT TTCTGAGCCC CAGCTACCTC
TCCAAGCGAT TCAAGAGCGA GACGGGGATG ACCATTCGGG AGTTCATCGT GCAGACGCGC
CTGAACAAGG CGAAGGATCT ACTGCTGCGC GACTTTCACC TCAAGGCGTA CGAGGTGGGC
GCGCACGTCG GCTATCCGGA CCCGACGTAT TTCAACAAAC TGTTCAAACG GCAGGTGGGG
CTCACGCCAA AGGCGTTTCG CGATCGCGCC ATGCGGCAAG CCCGGGGCTT CAAGCAGGAG
GATTCGCGGT CTTCCTGA
 
Protein sequence
MSVRMPKKTN VSSSLHAIRE VRTSWPSVTW DVLQQHPVEL DFREVERALD GVRDRQAWLV 
VVVRSSRVVP IYPFLAQIQS AGFDCVHLLS CDAAAYVMTL AAHHPERAME GFESALARLA
ADRTLVGVSS ACDEREVVRW WQALMEATAA SHWNVFESSA YSQGRRELVP LHEEDRTRLI
TRAVTQLGDR GYEGIASVVE DLFAQLAERP TKLEDVAELC AQFIMAAVGQ RQADGRDRML
QVPISTRQWL RFVAEECPKW WDWRDKLKQA LMVVLGREEA VRTAHSAQIG QVIEIIERHY
DSDLDVATLA SQVFLSPSYL SKRFKSETGM TIREFIVQTR LNKAKDLLLR DFHLKAYEVG
AHVGYPDPTY FNKLFKRQVG LTPKAFRDRA MRQARGFKQE DSRSS