| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0853 |
|---|
| Symbol | |
|---|
| ID | 8424346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 929069 |
|---|
| End bp | 929866 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645026966 |
|---|
| Product | Cof-like hydrolase |
|---|
| Protein accession | YP_003184282 |
|---|
| Protein GI | 258510848 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTC GCTTTGCGTT TTTTGACATC GACGGCACGC TGATCGATGA TCGGCGCGAG
CTTTCGCCGC GCGTCGAGGA GGCCCTCGCG GCGCTGAGGC GCCGAGGCGT CGAGACGGCC
ATCGCCACGG GGCGGGCGCC AGATCAGCTT CGCCCCATCG CCGAGCGGCT CGGATTCGAT
TCGTACGTCT GCTGCAACGG CGGCCTCGCC GTGTATCGCG GCGACAAGGT GCTGGCGGCG
TCTGTGCCGC GCGACGTGAT CGCCTCGTTC GTCGAACTCG CCGAATCGAA CGGCTATCCC
GTCGTGGTCG CCGGGGACGA GGCGTGCTAC GCCAATCGGC GTGATCACGC CGAAATCCGC
GAGGCGTATC GGTTCCTGGG CTTGCCAAGC GAGCCCGTCT ACGATCCGGA CGCGTGGAAG
CGGGAAGACG TGTATCAACT CTATCTCTTC TGCAAGCCGG GACAGGAGGC TCCGTTTGTC
GAAGCGTATC GCGACGCGCT TCGGTTCATC CGGCCCCATC GCTTTTACCT GGATGTGTTT
CCTGCGGGCG TGTCCAAAGC GACGGGTGTC GAGGCCATCC TCCGCAGCGC CGGCTGCAGC
AAGGAGGAGG CGGTGGCGTT TGGCGACAGC GAGAACGACG TGGAGATGCT GAAGTACGTG
GGGATGGGCG TCGCCATGGG AAACGCCGCC GAGCCGGCCA AGCGCGCGGC GAGGCGGATC
ACGGGCTCCG TGGACGAGGG CGGCATCTTC GCCGCGCTCG TCGATCTCGG CTTGATCGAA
GGGCAGCCGG TGCCGTGA
|
|---|
| Protein sequence | MAIRFAFFDI DGTLIDDRRE LSPRVEEALA ALRRRGVETA IATGRAPDQL RPIAERLGFD
SYVCCNGGLA VYRGDKVLAA SVPRDVIASF VELAESNGYP VVVAGDEACY ANRRDHAEIR
EAYRFLGLPS EPVYDPDAWK REDVYQLYLF CKPGQEAPFV EAYRDALRFI RPHRFYLDVF
PAGVSKATGV EAILRSAGCS KEEAVAFGDS ENDVEMLKYV GMGVAMGNAA EPAKRAARRI
TGSVDEGGIF AALVDLGLIE GQPVP
|
|---|
| |