Gene Aaci_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0823 
Symbol 
ID8424316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand- 
Start bp893185 
End bp893838 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID645026938 
ProductFMN-binding negative transcriptional regulator 
Protein accessionYP_003184254 
Protein GI258510820 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00293061 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATATCC CGAGATCCTT TGAACTCAAG GATGCGCAGC TTATCGAAAC CGTTCTGCGC 
GAGCACAGCT TTGCGGTACT CGTGACCTCG GTCGGCGAAG ACATCATGGC GACCCACGTC 
CCTCTCGTCT ACGATCCGGC CGAGGCGGCG CTCTTCGGAC ACCTGGCGCG GGCCAATCCC 
CAGGCCAAGC ATCTTCACGA GGCACAGTGC CTGGCCGTCT TTCAGGGACC GCACGCCTAC 
GTCTCACCCG CCTGGTACGG ACTTGCTGAT CAAGTGCCGA CGTGGAACTA CATCGCCGTC 
CACGTGTACG GCCGCGCGCG CGTGATCGAA GATGAGGAAG CCGTCGCGGA TCTTTTGCAG 
CGCCTTCTCC TCACGTACGA TCCGCAGTCC CCGCTGCCCG CCGACCGCGA TCGCCCGTAC 
TATCGAAACC TGATGCGCGG CATCGTCGCC TTTCGCATCG ACATCGCGCG CATCAAGGCG 
GCGGCGAAAC TCAGCCAGAA CAAGCCGCTC GAGGTTCGAG CGCGCGTCGT GGAAGCGCTT 
GAGTCGCAGG ACGACGCCAA TTCGCGCGCT GTCGCCGCTT GGATGCGGCG CCTGAAGCTT 
ACCCACCTCG GCGACGACGA CGGGAACGAA TCCAAACCGA AGGGAGCCTC CTGA
 
Protein sequence
MYIPRSFELK DAQLIETVLR EHSFAVLVTS VGEDIMATHV PLVYDPAEAA LFGHLARANP 
QAKHLHEAQC LAVFQGPHAY VSPAWYGLAD QVPTWNYIAV HVYGRARVIE DEEAVADLLQ 
RLLLTYDPQS PLPADRDRPY YRNLMRGIVA FRIDIARIKA AAKLSQNKPL EVRARVVEAL 
ESQDDANSRA VAAWMRRLKL THLGDDDGNE SKPKGAS