Gene Aaci_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0800 
Symbol 
ID8424293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp873581 
End bp874504 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content64% 
IMG OID645026916 
Productmethylisocitrate lyase 
Protein accessionYP_003184232 
Protein GI258510798 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID[TIGR02317] methylisocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0629223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGTGGC TGGTGGAAGA GCAACCGAGC CAAGAGCAGT TGGCCAAGCG GTTCCTCGAG 
CGCATTCAGG AGCCGCGGAT CCTCAAAATC CCCGGCGCGC ACGACGGGCT GACGGCGCGC
ATCGCGAAGC AGGCGGGATT TGAAGCCATC TACCTGTCCG GCGCGGCGTA CACGGCGAGC
CGCGGACTGC CCGATCTCGG CATCGTGTAC TCGAACGAAG TCGCTGAGCG CGCGTCCGAT
CTCGTCCGGG CCTCCGGCCT GCCGGTGCTC GTCGACATCG ACACCGGCTA CGGCGGCGTG
CTCAACGTCG CGCGCACCGC GAAGGAGATG GTCGAAGCGC GCGTGGCGGC GGTGCAGATT
GAAGATCAGG TCATGCCCAA GAAGTGCGGG CATTTGAACG GCAAGAAGCT CGTCGAGCCG
TCGGAGATGG TGGAGAAGAT CCGCATGTTG AAGACGGTGG CGCCCACGCT CATGGTGGTG
GCCCGATCCG ATGCGAAAAG CGTGGAGGGA CTCGAAGCGC TCGTGGAGCG CGCCAATCGG
TACGTGGAGG CGGGCGCGGA CGCCGTTTTC CCGGAGGCCT TGACGACGGA AGAGGAGTTC
CGCTATGTTG CGGAGCGGGT TCGTGTTCCG CTGCTCGCGA ACATGACGGA ATTCGGGAAG
ACGCCCTACT ACACCGCGGA CCAGTTCGAG TCGTGGGGCT ATCGCATGGT GATTTATCCC
GTGACGAGCG TCCGCGTGGC GGCGAAGGCC ATCGAGCGCG TGTTCGAAGC GATTCAGCGC
GAGGGGACGC AGAAGTCGTT CCTGTCGGAG ATGCAGTCGC GCGAGGAGCT GTACCAAACC
ATCCGCTACT TCGATTACGA GGCGCTCGAC GAGCACATCG CCAAGACGGT GCTCGAGGAT
TCGATGAAGC GCGCGGACAG ATGA
 
Protein sequence
MAWLVEEQPS QEQLAKRFLE RIQEPRILKI PGAHDGLTAR IAKQAGFEAI YLSGAAYTAS 
RGLPDLGIVY SNEVAERASD LVRASGLPVL VDIDTGYGGV LNVARTAKEM VEARVAAVQI
EDQVMPKKCG HLNGKKLVEP SEMVEKIRML KTVAPTLMVV ARSDAKSVEG LEALVERANR
YVEAGADAVF PEALTTEEEF RYVAERVRVP LLANMTEFGK TPYYTADQFE SWGYRMVIYP
VTSVRVAAKA IERVFEAIQR EGTQKSFLSE MQSREELYQT IRYFDYEALD EHIAKTVLED
SMKRADR