Gene Aaci_0747 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0747 
Symbol 
ID8424239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp799402 
End bp802113 
Gene Length2712 bp 
Protein Length903 aa 
Translation table11 
GC content65% 
IMG OID645026863 
Productribonuclease R 
Protein accessionYP_003184180 
Protein GI258510746 
COG category[K] Transcription 
COG ID[COG0557] Exoribonuclease R 
TIGRFAM ID[TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.197271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTGGAAAG AGCGATTGCT TGAATACATG CGTTCGGAGG AGTACAGGCC GAGCACGGTC 
CAGGAACTGT GTGAGCGGCT CGGCGTGACG AGCGCGGCGG ACTTTCGCGC ATTTGTCCGC
CTTCTGAACG AGATGGAGGA CGCGGGGGAT CTCGTTCGCA CCAAGAACAA CCGATACGCG
CTGCCGGAGC AGATGAACTT CATTGCGGGC AGGTTGCAGC TCAAGGCGCG GGGTTACGGC
TTTGTCATCC CTGAAAACGA GGCGGAGGCG GACATCTATA TTCTGCAGAC CGCGCTCAAC
GGCGCGATGA GCGGAGACCG GGTGCTCGTG CGACTCCGCG AGGAGCGCGG CAAGGGGGCG
CAGGCCCACC GCGAGGGTGA GATCGTCAAG ATCCTGGAGC GCGGGAACGA CCGCATCGTG
GGCCAGATTG CCATTTACGC GCATCACGCC TTCGTCACGC CGCTCGACAA GCGGTTCCCG
GAGGACGTGT TTGTCCCGAA GGACGCGGTC GGGAACGCGC ACGACGGGCA GGTGGTGGTG
GTCGAGCTGA CGTCGTACCC CACGGCCACA CACGGGCCGG TGGGACGGGT GGTGGAAGTC
CTCGGCTATC CGGACGAGCC CGGCGTCGAC ATCCTGGCCA TTGTGCGGAA GTACAACCTC
CCGGAGGCGT TTCCCGAGGA TGTGCTCGCC GACGCCGAGC GGATCCCGCT GGAGATCGAT
CCCGCCGAGA TCGCGCGGAG AAAGGACTTC CGAGGCGAGA CCATCGTGAC CATCGACGGG
GACGATGCCA AAGACCTCGA CGACGCCGTA CACGTGAAAC GCCTGCCCAA CGGCCACTAC
GAGCTCGGCG TGCACATCGC CGACGTGGGC TACTACGTCA AGGAGAACAG CCCGCTCGAC
AAAGAGGCCT TTCGGCGCGG GACAAGCGTG TACTTGGTGG ATCGCGTCAT CCCGATGCTG
CCGCCGCGCT TGTCGAACAA CATCTGCTCG CTGAACCCCA AGGTGGATCG CCTCACGATG
TCGTGCGTGA TGGAGATCGA CGGGCAGGGG CGCGTCGTCT CCCACGAGAT TGTGCCGAGC
GTGATTCGGA CGGCGGAGCG CATGACCTAC AACGACGTGC GCAAGATCCT CGAGGACGAA
GACGAGGAGC TCCGGGCGCG CTACGCGCCG CTCGTGCCCA TGTTCGAACG GATGCGCGAA
CTGGCGCTCA TTCTGCGGGA CAAGCGCATG CGGCGGGGGG CCATCGACTT CGACTTTGAC
GAGATCAAGG TGCGGGTGAA CGATCTCGGC GAGCCCACCT CCATCGAGCC GCGCCCGCGT
TCCATCGCGG AGCGGATCAT CGAGGAGTTC ATGCTCGCCG CCAACGAAAC CGTCGCCGAG
CACTTTCACT GGCTCGGCGT GCCGTTCATC TACCGCGTGC ACGACGAGCC CGATCCGGAC
AAGATCATCC ACCTCAATCT GTTCCTTCAC AATTTCGGTT ACCATGTGAA GGGGTCGGCC
GGGGGCAAGG TCCATCCCCG CGCGCTGCAG GAAGTCCTGA ATGAGGTCGA GGGCAAGCGC
GAGGCGCGGA TGATCTCGAT GGTGATGTTG CGGTCGATGC AGCAGGCGAA GTATCGCCCG
GAGTGCACGG GGCACTTCGG GCTCGCGGCG GAATATTACA CGCACTTCAC GTCGCCCATC
CGCCGATATC CAGACCTGGC CATCCACCGC ATCATTCGCG AGGTGCTGAC GCGCGGATCA
CTGTCTCCGC AGCGCGAGGC GCATCTGCGC GAGTTTGTCG CCGAGGCGAG CCGGCAGTCG
AGCGAACGGG AGCGGATCGC CCAGGAGGCG GAGCGCGAAG TCGATCAGTT GAAGATGGTC
GAGTACATGC AGGCGCACAT CGACGAGGAG TTTGACGGCA TCATCTCGGG CGTCGTCCCG
TTTGGCCTGT TTGTGCAACT GGACAACGGT GTCGAGGGCC TGATCCACAT CAGCGAACTG
TCGGACGATT ACTACGTGCT GCACGAGCGC CAGATGGCGC TCATCGGCGA GCGCACCCGG
CGCGTGTTTC GCATTGGCGA TCCCGTCCGC GTCGTGGTGA TACGGGCGGT CAAAGAGGAT
TTGCGGATCG ACTTCGGACT CGTGGAGCAT CTGCGCGAAG CGACGTACGT CGGCGGTGAA
GGCCCGGGCG CGATCGTGTA TGATGAGGAT CTGACGCCGA AGGAACGGCG GGAAACCGAG
CGCCGCAGGC GCGAGGCGGC TTCCCGCGCC AGCGGCCGGA GGGAGCGCGA CGACAAGCGC
CATCGCGCGC GGCGAGATCG AAAAGGGGAG GCGCGCGCGG GCGTCCGCCT GTCCGACTGG
AACGACGGGG AAGAAGAGCG ATCGGCGGCT TTGGGCGACA TGTTGCCGCA CGAACTTCCG
TACGACGCCT GGGACGAGGA GTATCCGGAT CCGCGTGCCC AGCGCGGGCG GAAGCGAGGT
GGCCGCGGCA GGGAAGATGA AGCACGGCCG TCGGCAGATG GCCGGATTGC GGGTGGCCGC
TTCGAGGCGG CGTCCACTCG GCGCGGCGGC TACCGCACTT GGCCGACTTG GGAGGCGGAC
GGAGGCAGCG GCCGAGGTGC AAGAACAAGC GGGAATGGGC GATCGCGGCC GGGGGAGAAA
CCGGCCGGGA AACGGAAGTC GGAGGCAGGG AAATCGGGCA AGCGCGGTTC GCGCAAGAAG
CGGAAACGGT GA
 
Protein sequence
MWKERLLEYM RSEEYRPSTV QELCERLGVT SAADFRAFVR LLNEMEDAGD LVRTKNNRYA 
LPEQMNFIAG RLQLKARGYG FVIPENEAEA DIYILQTALN GAMSGDRVLV RLREERGKGA
QAHREGEIVK ILERGNDRIV GQIAIYAHHA FVTPLDKRFP EDVFVPKDAV GNAHDGQVVV
VELTSYPTAT HGPVGRVVEV LGYPDEPGVD ILAIVRKYNL PEAFPEDVLA DAERIPLEID
PAEIARRKDF RGETIVTIDG DDAKDLDDAV HVKRLPNGHY ELGVHIADVG YYVKENSPLD
KEAFRRGTSV YLVDRVIPML PPRLSNNICS LNPKVDRLTM SCVMEIDGQG RVVSHEIVPS
VIRTAERMTY NDVRKILEDE DEELRARYAP LVPMFERMRE LALILRDKRM RRGAIDFDFD
EIKVRVNDLG EPTSIEPRPR SIAERIIEEF MLAANETVAE HFHWLGVPFI YRVHDEPDPD
KIIHLNLFLH NFGYHVKGSA GGKVHPRALQ EVLNEVEGKR EARMISMVML RSMQQAKYRP
ECTGHFGLAA EYYTHFTSPI RRYPDLAIHR IIREVLTRGS LSPQREAHLR EFVAEASRQS
SERERIAQEA EREVDQLKMV EYMQAHIDEE FDGIISGVVP FGLFVQLDNG VEGLIHISEL
SDDYYVLHER QMALIGERTR RVFRIGDPVR VVVIRAVKED LRIDFGLVEH LREATYVGGE
GPGAIVYDED LTPKERRETE RRRREAASRA SGRRERDDKR HRARRDRKGE ARAGVRLSDW
NDGEEERSAA LGDMLPHELP YDAWDEEYPD PRAQRGRKRG GRGREDEARP SADGRIAGGR
FEAASTRRGG YRTWPTWEAD GGSGRGARTS GNGRSRPGEK PAGKRKSEAG KSGKRGSRKK
RKR