Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0747 |
Symbol | |
ID | 8424239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 799402 |
End bp | 802113 |
Gene Length | 2712 bp |
Protein Length | 903 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 645026863 |
Product | ribonuclease R |
Protein accession | YP_003184180 |
Protein GI | 258510746 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.197271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGGAAAG AGCGATTGCT TGAATACATG CGTTCGGAGG AGTACAGGCC GAGCACGGTC CAGGAACTGT GTGAGCGGCT CGGCGTGACG AGCGCGGCGG ACTTTCGCGC ATTTGTCCGC CTTCTGAACG AGATGGAGGA CGCGGGGGAT CTCGTTCGCA CCAAGAACAA CCGATACGCG CTGCCGGAGC AGATGAACTT CATTGCGGGC AGGTTGCAGC TCAAGGCGCG GGGTTACGGC TTTGTCATCC CTGAAAACGA GGCGGAGGCG GACATCTATA TTCTGCAGAC CGCGCTCAAC GGCGCGATGA GCGGAGACCG GGTGCTCGTG CGACTCCGCG AGGAGCGCGG CAAGGGGGCG CAGGCCCACC GCGAGGGTGA GATCGTCAAG ATCCTGGAGC GCGGGAACGA CCGCATCGTG GGCCAGATTG CCATTTACGC GCATCACGCC TTCGTCACGC CGCTCGACAA GCGGTTCCCG GAGGACGTGT TTGTCCCGAA GGACGCGGTC GGGAACGCGC ACGACGGGCA GGTGGTGGTG GTCGAGCTGA CGTCGTACCC CACGGCCACA CACGGGCCGG TGGGACGGGT GGTGGAAGTC CTCGGCTATC CGGACGAGCC CGGCGTCGAC ATCCTGGCCA TTGTGCGGAA GTACAACCTC CCGGAGGCGT TTCCCGAGGA TGTGCTCGCC GACGCCGAGC GGATCCCGCT GGAGATCGAT CCCGCCGAGA TCGCGCGGAG AAAGGACTTC CGAGGCGAGA CCATCGTGAC CATCGACGGG GACGATGCCA AAGACCTCGA CGACGCCGTA CACGTGAAAC GCCTGCCCAA CGGCCACTAC GAGCTCGGCG TGCACATCGC CGACGTGGGC TACTACGTCA AGGAGAACAG CCCGCTCGAC AAAGAGGCCT TTCGGCGCGG GACAAGCGTG TACTTGGTGG ATCGCGTCAT CCCGATGCTG CCGCCGCGCT TGTCGAACAA CATCTGCTCG CTGAACCCCA AGGTGGATCG CCTCACGATG TCGTGCGTGA TGGAGATCGA CGGGCAGGGG CGCGTCGTCT CCCACGAGAT TGTGCCGAGC GTGATTCGGA CGGCGGAGCG CATGACCTAC AACGACGTGC GCAAGATCCT CGAGGACGAA GACGAGGAGC TCCGGGCGCG CTACGCGCCG CTCGTGCCCA TGTTCGAACG GATGCGCGAA CTGGCGCTCA TTCTGCGGGA CAAGCGCATG CGGCGGGGGG CCATCGACTT CGACTTTGAC GAGATCAAGG TGCGGGTGAA CGATCTCGGC GAGCCCACCT CCATCGAGCC GCGCCCGCGT TCCATCGCGG AGCGGATCAT CGAGGAGTTC ATGCTCGCCG CCAACGAAAC CGTCGCCGAG CACTTTCACT GGCTCGGCGT GCCGTTCATC TACCGCGTGC ACGACGAGCC CGATCCGGAC AAGATCATCC ACCTCAATCT GTTCCTTCAC AATTTCGGTT ACCATGTGAA GGGGTCGGCC GGGGGCAAGG TCCATCCCCG CGCGCTGCAG GAAGTCCTGA ATGAGGTCGA GGGCAAGCGC GAGGCGCGGA TGATCTCGAT GGTGATGTTG CGGTCGATGC AGCAGGCGAA GTATCGCCCG GAGTGCACGG GGCACTTCGG GCTCGCGGCG GAATATTACA CGCACTTCAC GTCGCCCATC CGCCGATATC CAGACCTGGC CATCCACCGC ATCATTCGCG AGGTGCTGAC GCGCGGATCA CTGTCTCCGC AGCGCGAGGC GCATCTGCGC GAGTTTGTCG CCGAGGCGAG CCGGCAGTCG AGCGAACGGG AGCGGATCGC CCAGGAGGCG GAGCGCGAAG TCGATCAGTT GAAGATGGTC GAGTACATGC AGGCGCACAT CGACGAGGAG TTTGACGGCA TCATCTCGGG CGTCGTCCCG TTTGGCCTGT TTGTGCAACT GGACAACGGT GTCGAGGGCC TGATCCACAT CAGCGAACTG TCGGACGATT ACTACGTGCT GCACGAGCGC CAGATGGCGC TCATCGGCGA GCGCACCCGG CGCGTGTTTC GCATTGGCGA TCCCGTCCGC GTCGTGGTGA TACGGGCGGT CAAAGAGGAT TTGCGGATCG ACTTCGGACT CGTGGAGCAT CTGCGCGAAG CGACGTACGT CGGCGGTGAA GGCCCGGGCG CGATCGTGTA TGATGAGGAT CTGACGCCGA AGGAACGGCG GGAAACCGAG CGCCGCAGGC GCGAGGCGGC TTCCCGCGCC AGCGGCCGGA GGGAGCGCGA CGACAAGCGC CATCGCGCGC GGCGAGATCG AAAAGGGGAG GCGCGCGCGG GCGTCCGCCT GTCCGACTGG AACGACGGGG AAGAAGAGCG ATCGGCGGCT TTGGGCGACA TGTTGCCGCA CGAACTTCCG TACGACGCCT GGGACGAGGA GTATCCGGAT CCGCGTGCCC AGCGCGGGCG GAAGCGAGGT GGCCGCGGCA GGGAAGATGA AGCACGGCCG TCGGCAGATG GCCGGATTGC GGGTGGCCGC TTCGAGGCGG CGTCCACTCG GCGCGGCGGC TACCGCACTT GGCCGACTTG GGAGGCGGAC GGAGGCAGCG GCCGAGGTGC AAGAACAAGC GGGAATGGGC GATCGCGGCC GGGGGAGAAA CCGGCCGGGA AACGGAAGTC GGAGGCAGGG AAATCGGGCA AGCGCGGTTC GCGCAAGAAG CGGAAACGGT GA
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Protein sequence | MWKERLLEYM RSEEYRPSTV QELCERLGVT SAADFRAFVR LLNEMEDAGD LVRTKNNRYA LPEQMNFIAG RLQLKARGYG FVIPENEAEA DIYILQTALN GAMSGDRVLV RLREERGKGA QAHREGEIVK ILERGNDRIV GQIAIYAHHA FVTPLDKRFP EDVFVPKDAV GNAHDGQVVV VELTSYPTAT HGPVGRVVEV LGYPDEPGVD ILAIVRKYNL PEAFPEDVLA DAERIPLEID PAEIARRKDF RGETIVTIDG DDAKDLDDAV HVKRLPNGHY ELGVHIADVG YYVKENSPLD KEAFRRGTSV YLVDRVIPML PPRLSNNICS LNPKVDRLTM SCVMEIDGQG RVVSHEIVPS VIRTAERMTY NDVRKILEDE DEELRARYAP LVPMFERMRE LALILRDKRM RRGAIDFDFD EIKVRVNDLG EPTSIEPRPR SIAERIIEEF MLAANETVAE HFHWLGVPFI YRVHDEPDPD KIIHLNLFLH NFGYHVKGSA GGKVHPRALQ EVLNEVEGKR EARMISMVML RSMQQAKYRP ECTGHFGLAA EYYTHFTSPI RRYPDLAIHR IIREVLTRGS LSPQREAHLR EFVAEASRQS SERERIAQEA EREVDQLKMV EYMQAHIDEE FDGIISGVVP FGLFVQLDNG VEGLIHISEL SDDYYVLHER QMALIGERTR RVFRIGDPVR VVVIRAVKED LRIDFGLVEH LREATYVGGE GPGAIVYDED LTPKERRETE RRRREAASRA SGRRERDDKR HRARRDRKGE ARAGVRLSDW NDGEEERSAA LGDMLPHELP YDAWDEEYPD PRAQRGRKRG GRGREDEARP SADGRIAGGR FEAASTRRGG YRTWPTWEAD GGSGRGARTS GNGRSRPGEK PAGKRKSEAG KSGKRGSRKK RKR
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