Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aaci_0683 |
Symbol | |
ID | 8424175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
Kingdom | Bacteria |
Replicon accession | NC_013205 |
Strand | + |
Start bp | 729827 |
End bp | 731881 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 645026802 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_003184119 |
Protein GI | 258510685 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.992096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTGTCG TGGACGCCAA ATCGGCCCTG TCCCTGGAAG AAGCGCGTGC GCGCGCCAAA GTGCTCCGGG AACAAATCGA ATATCACAAT CGAAAGTACT ACCTGGAGGA CAATCCGGAG ATCTCCGACG CGGAGTGGGA CGCGCTGATG CGGGATCTCA TCGAGCTTGA GCGCAAGTAC CCAGAGCTCG TCGATCCGGC CTCGCCCACG CAGCGTGTGG GCGCCCCGGC GCTCGAGGGA TTCGCCAAGG TCGTGCACGA GGTGCCCATG CTGTCGCTCG CAAACGCGTA TTCGACGGAG GATCTGCTCG ACTGGGATCG CCGCGTGCGA CAGGCGGTGG GCGACGACGT CCGCTACGTG TGCGAGCTCA AGGTCGACGG CTTGGCCGTG GCGCTTCGCT ACCAGGACGG CCGGCTCGTG CTCGGTGCAA CGCGCGGCGA CGGATCGGTC GGGGAGGACA TCACGGCCAA CATTCGCACC ATTCGCAACG TGCCGCTTGA ACTTTCGGAA CCCGTGTCGC TCGAGGTGCG AGGCGAGGCG TACATGCCAA AGCGCGAGTT CATGCGGCTC AACGAGCTTC GCGAGCAGCA GGGCGAGCCG CTTTTCGCCA ATCCGCGCAA CGCGGCCGCC GGATCGCTGC GCCAGCTCGA TCCGGCCGTG GCCGCGAGCC GGAGGCTCGG CGTGATCGTG TACCAGTTGG TGCGCGCCGA GGCGCACGGG TGTGAGACGC ACAGCCAGGC GCTGGATTAC GTGGCCCGCC TCGGCCTGCC CGCGCATCGC GAGCGGCACG TGTGCGCGAA CATCGAGGAC GTGATCGCGT ACATCGAGGC GTGGGCGGAC AAGCGGCACG AACTGCCGTA CGCGACGGAC GGCATGGTGG TGAAGGTCGA CTCCCTCGCG CTGCAGGCGC GCCTCGGCGC CACCGCAAAG AGCCCGCGCT GGGCCATTGC GTACAAATAC GCGGCGGAGC AGGCGGAGAC CACGCTTCGC GCCATCGAGT TGAACGTCGG CCGCACGGGT GTAGTCACAC CGACGGCTGT GTTCGATCCC GTCCAGCTCG CGGGCACCAC GGTCTCGAGG GCGTCGCTGC ACAACGAGGA CTTGGTGCGC GAGAAGGACA TCCGCGTGGG CGACGTCATT GTTGTGCAGA AGGCGGGGGA CATCATTCCC GAGGTCATTC GATCGCTGCC CGAGCGGCGC ACCGAGCCGC TGCCCGAATT TCGCATGCCG GAGACGTGCC CGCAGTGCGG ATCGCGGCTC GTGCGGCTCG ACGGCGAGGT GGCGTGGCGC TGCATCAACC CCGACTGCCC GGCTCTCCTG CGCGAGGGGC TCATCCACTT CTGTTCGCGC GACGCGATGA ACATCGAGGG CCTCGGCGAG CAGTGGATCA CGGTGCTTCT GGACCGCGGG TTGGTACGGA CGCACGCGGA TTTGTATCGC CTCCGAAAGG CCGATCTCGT CCAACTGGAC CGGATGGGGG ATAAGCTCGC GGATAAACTG TTGCACAACA TCCAGGAGAG CAAGCGGAAC TCGCTCGAGC GCCTCTTGTT TGGACTCGGC ATCCGGCACG TGGGCGAGAA GGCGGCGAAG ACGTTGGCGG AACACTTCGT CACCATCGAC GCGCTGATGT CCGCGAGCGA GGAGGACTTG ATGGCGGTCC CCGACATCGG CCCCAAAGTC GCGCAGAGCA TCCGCCAGTA CTTCGATACG CCACGGGTGA GGCAGCTGAT TCAGGAGTTG AAAGACCTGG GCGTGAACAT GACCTACCTC GGCCCGCAGA AGGTGTCGGA CGGCCCACTC GCCGGAAAGA CGGTGGTATT GACCGGCGTG CTTCAGGCGG CGGATCGAAA GCAGGCGACG GCGTGGATCG AGCAGATGGG TGGCAAGGTC GCCTCGAGTG TCAGCGCGAA GACGGACGTG CTCATCGCGG GGGACAAGGC GGGATCGAAG CTCGCCAAGG CGCAGGAGAT CCTGCGGAAT CACCCGGACG CAAAGCTCGA GATCTGGGAT GAGGCGGCGT TTCTGCGCCT GGTGGACGAG GCGGGGTTGC GCTGA
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Protein sequence | MRVVDAKSAL SLEEARARAK VLREQIEYHN RKYYLEDNPE ISDAEWDALM RDLIELERKY PELVDPASPT QRVGAPALEG FAKVVHEVPM LSLANAYSTE DLLDWDRRVR QAVGDDVRYV CELKVDGLAV ALRYQDGRLV LGATRGDGSV GEDITANIRT IRNVPLELSE PVSLEVRGEA YMPKREFMRL NELREQQGEP LFANPRNAAA GSLRQLDPAV AASRRLGVIV YQLVRAEAHG CETHSQALDY VARLGLPAHR ERHVCANIED VIAYIEAWAD KRHELPYATD GMVVKVDSLA LQARLGATAK SPRWAIAYKY AAEQAETTLR AIELNVGRTG VVTPTAVFDP VQLAGTTVSR ASLHNEDLVR EKDIRVGDVI VVQKAGDIIP EVIRSLPERR TEPLPEFRMP ETCPQCGSRL VRLDGEVAWR CINPDCPALL REGLIHFCSR DAMNIEGLGE QWITVLLDRG LVRTHADLYR LRKADLVQLD RMGDKLADKL LHNIQESKRN SLERLLFGLG IRHVGEKAAK TLAEHFVTID ALMSASEEDL MAVPDIGPKV AQSIRQYFDT PRVRQLIQEL KDLGVNMTYL GPQKVSDGPL AGKTVVLTGV LQAADRKQAT AWIEQMGGKV ASSVSAKTDV LIAGDKAGSK LAKAQEILRN HPDAKLEIWD EAAFLRLVDE AGLR
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